Pairwise Alignments
Query, 1007 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 1415 a.a., cyclic di-GMP receptor MorA from Pseudomonas aeruginosa PA14
Score = 367 bits (942), Expect = e-105
Identities = 258/747 (34%), Positives = 380/747 (50%), Gaps = 46/747 (6%)
Query: 253 AGHVYKVIGYWYLYRAVFVTAVHHPYDALHQSERDLWREKERARVTLLSIGDGLIATDTA 312
+G V ++IG A +T +AL ++ R R R+ +I D + +TD
Sbjct: 689 SGRVARLIGV-----AKDITFTVEANNALRENGR-------RYRMLAENISDVIFSTDAE 736
Query: 313 GRVSLMNPVAERLTG----WTLGEAAGRPVTEVFDIENAE-TGQRVPVPVEQVLKNGEM- 366
S ++P + + G W L + T + +RV + K E+
Sbjct: 737 LNASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELR 796
Query: 367 VGLANHTVLVAC---DGTRSHIADMASPIRDRDGTLHGVVMVFQDVTETYASREALKDSL 423
H + C DG + I + D G++ + +D+++ + L+ +
Sbjct: 797 ENPGQHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAA 856
Query: 424 SLNTGILESAACGIIATTLDGVVRVFNREAERIFGYPAAEMIGSADLPRLYDPDELRAHA 483
+ + E + I+ T G + N R+ GY A+++ PRL D A+
Sbjct: 857 T----VFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQ--PRLLTADRQEAN- 909
Query: 484 DGLSIELDRPVKADFAALVAHTRCSGRPEPGEWTGVRRNGARISISTVTSVLRDSGGAVR 543
++A + SG E GE R+ G + +RD G +
Sbjct: 910 -------------QLKHVLASLQHSGSWE-GEILQKRKTGELYPSWVGITAVRDEEGDLV 955
Query: 544 GYLTVAMDVTERKQAERQIENLAFYDPLTNLPNRRLLMEHLDVHLRAARLGARCGALMFL 603
++ D++ERK +ER+I LA+YD LT+LPNR L + L L+ A + LMFL
Sbjct: 956 SFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFL 1015
Query: 604 DLDDFKGLNDARGHMVGDMLLRELAARLNATLRKGDLVCRLSGDEFVILLPDIGTTLEEA 663
DLD FK +ND+ GH GD +L+E+A RL+A + + D V R+ GDEF +LLP G E A
Sbjct: 1016 DLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDR-EIA 1074
Query: 664 TAIASKVAEKLRLAVAQPFQLDCCEHSIFASIGLTVFPKTPDESVEDLLKQADTAMYAAK 723
A +VAE + +A+PF L+ E + ASIG+ + P+ E + L+K ADTAMY AK
Sbjct: 1075 LKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAE-LSLLMKNADTAMYHAK 1133
Query: 724 DGGRNTIRDYDPAMLIEAQARLLLLQDLRKAVDAGEFTLFLQPQTSADGT-LVAAEALIR 782
+ G+N + Y M A RL L DLR+A++ GEF L QPQ + DG L AEAL+R
Sbjct: 1134 EMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLR 1193
Query: 783 WQHPQRGFVAPGAFIAEAEESGLILPIGDWVLMEACHVLRRLADAGSDC-HLSVNISPRQ 841
WQHP+RG V P FI EE GL+ +GDW+L EAC LR A +SVN+S RQ
Sbjct: 1194 WQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQ 1253
Query: 842 FRQPNFCAGVIAALRATRTDPRRLMLEITEGIAVGDCADTAAKMSELAALGISFSLDDFG 901
F + A L T P L LE+TE I + D A+ +S L LG++ ++DDFG
Sbjct: 1254 FADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFG 1313
Query: 902 TGFSSLSYLKRLPVREIKIDRSFVQDVDSNSHNAVLVETMLSIASRLGLKVVAEGVETAA 961
TG+SSL+YLK+ P+ +KIDRSFV + +A + ++++A L L V+AEGVE+ A
Sbjct: 1314 TGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQA 1373
Query: 962 ERDFLKDRGCAVFQGYHFDRPMSVEDF 988
+ DFL++ GC QGY F RPM E F
Sbjct: 1374 QLDFLREHGCDEVQGYLFGRPMPAEQF 1400
Score = 36.2 bits (82), Expect = 2e-05
Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 15/180 (8%)
Query: 393 RDRDGTLHGVVMVFQDVTETYASREALKDSLSLNTGILESAACGIIATTLDGVVRVFNRE 452
RDR G + ++ V +D+T T + AL+++ + E+ + I +T + +
Sbjct: 686 RDRSGRVARLIGVAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPS 745
Query: 453 AERIFGYPAAEMIGSADLPRLYDPDELRAHADGLSIELDRPV--KADFAALVAHTRCSGR 510
+ +FGY + + +P +L +GL + + + A L R
Sbjct: 746 VQHVFGYSPEWALLNGLHQTATNPRQL-GRLNGLLRRVRHAIGDRQKLAEL--------R 796
Query: 511 PEPGE----WTGVRRNGARISISTVTSVLRDSGGAVRGYLTVAMDVTERKQAERQIENLA 566
PG+ +R +G +I I ++ D G L +A D++++++AER++ A
Sbjct: 797 ENPGQHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAA 856
Score = 31.6 bits (70), Expect = 4e-04
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 290 REKERARVTLLSIGDGLIATDTAGRVSLMNPVAERLTGWTLGEA 333
R +A L +I + ++ T GR+S +NP AERL G + +A
Sbjct: 289 RSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQA 332
Score = 28.1 bits (61), Expect = 0.005
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 412 TYASREALKDSLSLNTGILESAACGIIATTLDGVVRVFNREAERIFGYPAAE 463
T AS+ +L+ + + I E ++ T DG + N +AER+FG +A+
Sbjct: 284 TLASQRSLRQAATALAAIDER----VLVTRADGRLSYLNPQAERLFGISSAQ 331