Pairwise Alignments

Query, 716 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 567 a.a., HAMP domain-containing methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  261 bits (668), Expect = 5e-74
 Identities = 149/371 (40%), Positives = 230/371 (61%), Gaps = 8/371 (2%)

Query: 351 GAALLLVICLGGILFARGITRPLSSMCDAMQRLAQGERALAVPAQERHDEIGRMAGAMQI 410
           G  +++ + +  +    GI+RPL  +  A+ ++A G+  + +P   R DEIG +A  + +
Sbjct: 200 GMVVMISLVISMVFTFFGISRPLMRLNGALDKMAGGQLDVEIPGAARGDEIGDIAKTVVV 259

Query: 411 FKEALIKADDLHAEQERVRALREE-----RTRQLERVTDGFDARVGGIVRAVASAAGGLE 465
            +E    AD    E+   +A ++E     R ++++++ D F+  VG IV AV+SA+  LE
Sbjct: 260 IRE---NADHRAREEAEQKAHQDEVAAQQRKQEMQKLADAFEGAVGRIVEAVSSASTELE 316

Query: 466 VTARSMSDGADRTLHEATSVAAAADQTASNVGTVASAANQLRASIGDIGRHIEESGRITQ 525
            +A  M+  A+       +VA A++   SNV +VASA  ++ +SI +I R +++S RI  
Sbjct: 317 ASASKMAHTAEEAEKLTAAVAGASEIATSNVQSVASATEEMASSIHEISRQVQDSSRIAS 376

Query: 526 AAIGAAAQAGETMRAVVETAGRIGTVVQLIHDIAAQTNLLALNATIEAARAGEAGKGFAV 585
           +A+  A +  + +  +   A RIG VV LI+ IA QTNLLALNATIEAARAGEAG+GFAV
Sbjct: 377 SAVQQANKTNDRINQLATAAQRIGDVVDLINTIAGQTNLLALNATIEAARAGEAGRGFAV 436

Query: 586 VANEVKHLAAQTAKATDEIGSQIGTMQSVTDGAAASIGQIATVIEDMGRISSIVAGAIDE 645
           VA EVK LA QTAKATDEI  QI  MQ+ T+ + ++I +I T I  M  ISS +A A+++
Sbjct: 437 VAAEVKALAEQTAKATDEISQQISGMQAATEESVSAIKEIGTTIGQMSEISSAIASAVEQ 496

Query: 646 QGTATMDIAANAEQAAKATQSVTAIIDGVARSADTTKTVAGEVLVSSQDLTRQAGHLRAE 705
           QG+AT +I+ N +QAA+ T  V+A I  V R A  T   + +VL +++ L+  +  L+ E
Sbjct: 497 QGSATQEISRNVQQAAQGTMQVSANIADVERGAAETGMSSSQVLAAARSLSTDSAQLKTE 556

Query: 706 IERFLADIKAA 716
           + RFL+ ++AA
Sbjct: 557 VARFLSSVRAA 567