Pairwise Alignments

Query, 197 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 6e-28
 Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 1/148 (0%)

Query: 47  YRLEPGNRVRIIVFEEPNLSGDFSLDSVGNIALPLAGNIPASGLTARETGKRIEDVLRRN 106
           YRL  G+++RI V++EP LS +  +   GNI  P  G I   G T  E    I D L  +
Sbjct: 26  YRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDGLL-D 84

Query: 107 ALLLNPSVSVEIQTFKPFYVMGEVRQPGEFPYTTGLTVLSAIARAGGYDYRARQSEVVLV 166
             L+NP+VSV I  ++PF+V G+V +PG +PY  GLTV  AI  AGG+  RA ++ + + 
Sbjct: 85  GYLINPNVSVSILEYRPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFIS 144

Query: 167 RPQGEEQKLYRADEFTPIMPGDIVKVLE 194
                E K  +A   + + PGDI+ V E
Sbjct: 145 SSDDPEAKPTKATLLSKLQPGDILTVAE 172