Pairwise Alignments

Query, 273 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Azospirillum sp. SherDot2

Subject, 289 a.a., nitrate ABC transporter, permease protein from Pseudomonas stutzeri RCH2

 Score =  156 bits (394), Expect = 5e-43
 Identities = 85/257 (33%), Positives = 145/257 (56%), Gaps = 9/257 (3%)

Query: 1   MTAIGKIWERFAWERAVVPLVIL----VAWEAVSRSGLLPAALLPPPTVVLHAWGDWVFG 56
           + A+ +   R+A ++ V PLVIL    V WE +       AAL PP  VV   W   +  
Sbjct: 23  LAALARRSGRYAVQQLVPPLVILLVLGVIWEMLCSGA--DAALPPPSQVVAETWELIIDP 80

Query: 57  FDETSQANSG-RWFADALSSAMRVAAGYAIAAASGILLGIAIGWWRWVERTVEPTIQMLR 115
           F +    + G  W    L+S  RVA GY +A  +G+ LG+ IG   W  R ++P  Q+LR
Sbjct: 81  FYDNGGNDVGLAW--QLLASLQRVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLR 138

Query: 116 PVPPVSWIPVAIIWFGIANKPAIFLVFLGAFFPILMNTIHGVKTADRNLIRAAAMMGATE 175
            VPP++W+P+++  F  ++  A+F++F+ A +PI++NT  G++   ++    A ++    
Sbjct: 139 TVPPLAWLPLSLAGFQDSHPSALFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNG 198

Query: 176 QQLLRHVVFPAALPSIFAGLRIGIGAAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDLVL 235
            +  + ++ PAA P IF GLRIG+G +W+  + AEM+    G+G+ +WD++   R   ++
Sbjct: 199 FEYFKTIMLPAAAPYIFTGLRIGVGLSWLAIIAAEMLIGGVGIGFFIWDAWNASRISDII 258

Query: 236 AAMASIGLLGYATDGLI 252
            A+  IG++G+  D L+
Sbjct: 259 LALVYIGVVGFVLDRLV 275