Pairwise Alignments

Query, 278 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 391 a.a., spermidine/putrescine transport system permease protein PotC from Phaeobacter inhibens DSM 17395

 Score =  147 bits (372), Expect = 3e-40
 Identities = 84/265 (31%), Positives = 150/265 (56%), Gaps = 11/265 (4%)

Query: 20  SFRIVMTGIALMALVLLVAPTVVVIWVSFTSG-------YSLKFPPPGYSLRWYAELWDA 72
           +FR++   I     + L+ P +VV+ +SF +          ++F P GYSL+ Y + +  
Sbjct: 125 TFRVICGAI----FIFLITPILVVMPLSFNAQDFFTFTPEMIRFDPEGYSLKHYRDFFTN 180

Query: 73  WQLQFAMMNSLTVAAWATGLSILLGVSASLGIARSPTLTAKVLDSLFLSPLVLPALAFGL 132
              Q AM NS+ +A  AT LS+  G  A++G+++      + + ++ +SP+++P +    
Sbjct: 181 ADWQQAMWNSIKIAPMATILSVGFGTLAAIGLSQPHVPFRRAIMAILISPMIVPLIISAA 240

Query: 133 SSLMFFSMIGVPVSPLTLIIGHTVVSVPFVVRNTVASLAQMNPSLLEASSSLGAGRWYGF 192
               F+S IG+  +   +++ H  + +PFV+    A+L   + SL  A++++GAG    F
Sbjct: 241 GMYFFYSRIGLQGTYFGVVLAHAALGIPFVIITVTATLVGFDRSLTRAAANMGAGPVTTF 300

Query: 193 RRVTLPLIRPGIMAGGFIAFMASFDNVPVSLFLRDAATDMLPIRMWQDLEGRLDVTVAAL 252
            RV +PLI PG+++GG  AF+ SFD V V LF+  A    LP +M+  L  ++  T+ A+
Sbjct: 301 FRVQMPLILPGVISGGLFAFITSFDEVVVVLFVGSAGQKTLPWQMFIGLREQISPTILAV 360

Query: 253 SGVLIVVTIGLMLVMERVAGLSKRL 277
           + +L+VV+I L+ V+E +   S+RL
Sbjct: 361 ATILVVVSICLLTVVEMLRRRSERL 385