Pairwise Alignments

Query, 414 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 376 a.a., amino acid ABC transporter, periplasmic-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 16/261 (6%)

Query: 24  AAAAVTALPFAAPSVLRAQTPVVKIGILQPVTGALAHDGDLGRAGAEMAINEINAAGGIK 83
           A   VT+L  AA +        V++G++ P+TG  A +G   R   E+   E+N AGGI 
Sbjct: 9   AVCMVTSLLMAATAFAAGP---VRVGLMCPLTGKWASEGQDMRNIVELLAEEVNKAGGIN 65

Query: 84  SLGGAKLEMLFGDARSTPEAGTQEVERMQAEGVSAIVGGFASPICLAASQAAARYDLPYL 143
              G K+E++  D    P       +++   GV+A++G + S +  A+        +  +
Sbjct: 66  ---GNKVELIVEDDGGDPRTAALAAQKLSTSGVTAVIGTYGSAVTEASQNIYDEAGIAQI 122

Query: 144 VDVGVSDQIMARGLTNTFRFSPGFGKVTQVALDNLTAINDKAGKPAKTVVLVHEDGLFGS 203
                + ++  +GL    R  P   +  +VA   +        K  K V L+H++  +  
Sbjct: 123 ATGSTNVRLTEKGLKLFLRTCPRDDEQGRVAAKVIK------NKGYKAVALLHDNSSYAK 176

Query: 204 GLAKLLQSELPKRGFEILETIAHPTPARDMSNVALRIRSLNPDLVIPSNYYGEFVLLART 263
           GLA   ++ L K G +I+   A     RD + +  ++++ NPD++  + YY E  +L R 
Sbjct: 177 GLADETKALLDKDGTKIVFYDALTPGERDYTAILTKLKAANPDIIFFTGYYPEVGMLLR- 235

Query: 264 MQQQRIKPKGIYAILGGAASN 284
              Q+++ K    ++GG A+N
Sbjct: 236 ---QKMEMKWNVPMMGGDAAN 253