Pairwise Alignments

Query, 685 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 766 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Acidovorax sp. GW101-3H11

 Score =  440 bits (1131), Expect = e-127
 Identities = 245/675 (36%), Positives = 378/675 (56%), Gaps = 8/675 (1%)

Query: 12  IFENAVEGIYQTTVDGRYLRVNPALADIYGYASPEDLIANLTDIACQLYVDPGKREAFAD 71
           I  +A  GI +   DG++L  N  L ++ G    + L  N  D+      D   R+    
Sbjct: 72  IVRHAPAGIARVAPDGQFLWANHRLVEMLGGTLAQVLSLNFRDVMVAQDRDWAIRQLERL 131

Query: 72  LMARQDRVLSFEARVFRRDGSIIWISESARCVRDAAGRIRYYEGTVQDITERK------- 124
           +    D  +         DG ++ +  +   V   +    +    VQD+ E K       
Sbjct: 132 MAGEIDHYVGERQCQRLDDGRLVPVLCTVTLVPVDSDEPAHLVCVVQDLDEIKAARAALQ 191

Query: 125 QHEEKIRLLATVFDSVADGILIVDPELTVQAINPAYEIMTGFQREELLRKPLVLFAPGSH 184
           + E + RL ATV D+  +G+++ D    + ++N A+  + G+  +ELL K   +F  G H
Sbjct: 192 RSEARQRLAATVVDNTMEGVVVTDAHSRILSVNAAFTRLLGYTEDELLGKTPRVFKSGRH 251

Query: 185 EREFVDAIWTTARQAGRWQGEVTSFRHSGDAFAAALSVTSVRAPNGVLEHYVLTIADISQ 244
           ++ F +A+W      G WQGE+ + R +G+ F   +S+++VR P G + HYV    DIS+
Sbjct: 252 DQAFYEAMWAALLDTGHWQGEIWNRRKNGEIFPEHMSLSAVRDPAGEITHYVCMFTDISE 311

Query: 245 RKSQEHQIRYQASFDRLTDLPNRWLVCERLEEAIVRAQRTKSKVAVAFLDLNRFKQVNDT 304
            K+Q+ ++ + A  D LT L NR     +LE+A+  A+ +   +AV  L+L+RFK VND+
Sbjct: 312 EKAQQRRLEFLAHNDALTGLSNRSWFGHQLEQAVQEARASGEFIAVLLLNLDRFKDVNDS 371

Query: 305 LGHHAGDELLKLVARRLRNCTRMTDTVGRLGGDEFLIVAPDAADRSAGARLVEKVLYSMS 364
            GH  GDE+LK +AR++++  R  D +GR+ GDE  +VA         A +   ++ +++
Sbjct: 372 YGHTIGDEVLKHIARQVQSALRPGDVLGRMAGDELAVVARHLRHADGAAAMARHLIRAVA 431

Query: 365 EPF-SVHNQELFCGASIGIAFYPDDGETADQLLRNADLAMYHAKRNPEHKYVFYDSGMRE 423
           EP+ S    E+  G S+GI  +PD   T + LL+ A  A+Y AK      + F+   M +
Sbjct: 432 EPWRSPDGLEVVAGVSVGICMFPDHAHTTELLLQGAHAAVYGAKARGRGAWCFFHEAMTQ 491

Query: 424 RSGFTLGLESDLRRASGGDEFELHFQPKIDLVGNRTIGAEALIRWRHPVRGVVSPAEFIP 483
            +   L LES LR A      ++++QP++D+   R +GAEAL+RW  P  G++SPA FIP
Sbjct: 492 AARERLELESRLRLALMQGHLQMYYQPQVDIATGRILGAEALVRWNDPQEGLISPARFIP 551

Query: 484 LAEETGLIWEIGAWTLIESCRRLADWIRRDLPIPSVSVNLSPRQFQDARLVGFVRSVVES 543
           +AE +G+I  +G W L E CR+  +W    LP   ++VN+SPRQF    L G   + +  
Sbjct: 552 VAETSGVIGPLGEWVLREVCRQGQEWRDAGLPELMLAVNVSPRQFHLTDLAGCASAALAD 611

Query: 544 AGIPADRLELELTEGAMIGDIEKAVTILNGLKDIGVRLSIDDFGTGYSSLAYLKRFPIDT 603
           +G PA  LELE+TE A+    E+A  +L  L+++G+R+++DDFGTGYSSLA LKRFPID 
Sbjct: 612 SGFPARLLELEITETALAERTEEARQVLVRLRELGLRIAVDDFGTGYSSLAQLKRFPIDV 671

Query: 604 LKIDRSFVRDIVKSTTDPAIVGTIVNLAESLGFDTIAEGVETQEQADMLRQQRCTRIQGY 663
           LKID+ F+RDI +S  D AI   I+ +  S+G   +AEGVET+ Q   LR++ C   QGY
Sbjct: 672 LKIDQGFIRDIPQSEDDMAISAAIIAMGHSMGLSVLAEGVETEGQLAFLRERGCDTYQGY 731

Query: 664 LISRPLPIDQFEAFL 678
           L SRP+P + F A L
Sbjct: 732 LCSRPVPAEGFAALL 746



 Score = 42.4 bits (98), Expect = 8e-08
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 11  SIFENAVEGIYQTTVDGRYLRVNPALADIYGYASPEDLIANLTDIACQLYVDPGKREAFA 70
           ++ +N +EG+  T    R L VN A   + GY   E     L     +++      +AF 
Sbjct: 202 TVVDNTMEGVVVTDAHSRILSVNAAFTRLLGYTEDE-----LLGKTPRVFKSGRHDQAFY 256

Query: 71  DLM-ARQDRVLSFEARVF--RRDGSIIWISESARCVRDAAGRIRYYEGTVQDITERKQHE 127
           + M A       ++  ++  R++G I     S   VRD AG I +Y     DI+E K  +
Sbjct: 257 EAMWAALLDTGHWQGEIWNRRKNGEIFPEHMSLSAVRDPAGEITHYVCMFTDISEEKAQQ 316

Query: 128 EKIRLLA 134
            ++  LA
Sbjct: 317 RRLEFLA 323