Pairwise Alignments

Query, 685 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 1415 a.a., cyclic di-GMP receptor MorA from Pseudomonas aeruginosa PA14

 Score =  484 bits (1247), Expect = e-141
 Identities = 269/694 (38%), Positives = 400/694 (57%), Gaps = 20/694 (2%)

Query: 8    QYRSIFENAVEGIYQTTVDGRYLRVNPALADIYGYASPEDLIAN--------------LT 53
            +YR + EN  + I+ T  +     V+P++  ++GY SPE  + N              L 
Sbjct: 718  RYRMLAENISDVIFSTDAELNASYVSPSVQHVFGY-SPEWALLNGLHQTATNPRQLGRLN 776

Query: 54   DIACQLYVDPGKREAFADLMARQDRVLSFEARVFRRDGSIIWISESARCVRDAAGRIRYY 113
             +  ++    G R+  A+L     + L F     R DG  I I      + D   R    
Sbjct: 777  GLLRRVRHAIGDRQKLAELRENPGQHL-FALDCLRADGRKIPIELRIVLMWDEHDRFEGL 835

Query: 114  EGTVQDITERKQHEEKIRLLATVFDSVADGILIVDPELTVQAINPAYEIMTGFQREELLR 173
             G  +DI+++++ E ++R+ ATVF+     I++ DP   +  +N ++  +TG+   ++L 
Sbjct: 836  LGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLD 895

Query: 174  KPLVLFAPGSHEREFVDAIWTTARQAGRWQGEVTSFRHSGDAFAAALSVTSVRAPNGVLE 233
            +   L      E   +  +  + + +G W+GE+   R +G+ + + + +T+VR   G L 
Sbjct: 896  QQPRLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLV 955

Query: 234  HYVLTIADISQRKSQEHQIRYQASFDRLTDLPNRWLVCERLEEAIVRAQRTKSKVAVAFL 293
             +V   +DIS+RK+ E +I   A +D LT LPNR L  +RL  A+ +A+R    V + FL
Sbjct: 956  SFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFL 1015

Query: 294  DLNRFKQVNDTLGHHAGDELLKLVARRLRNCTRMTDTVGRLGGDEFLIVAPDAADRSAGA 353
            DL+RFK +ND+LGH AGD +L+ VA RL  C    DTV R+GGDEF ++ P   DR    
Sbjct: 1016 DLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIAL 1075

Query: 354  R----LVEKVLYSMSEPFSVHNQELFCGASIGIAFYPDDGETADQLLRNADLAMYHAKRN 409
            +    + E +L  ++ PF++  +E F  ASIG+A  P DG     L++NAD AMYHAK  
Sbjct: 1076 KRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEM 1135

Query: 410  PEHKYVFYDSGMRERSGFTLGLESDLRRASGGDEFELHFQPKIDLVGNRTIGAEALIRWR 469
             ++ + FY + M  R+   L LESDLRRA    EF LH+QP+    G R  GAEAL+RW+
Sbjct: 1136 GKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQ 1195

Query: 470  HPVRGVVSPAEFIPLAEETGLIWEIGAWTLIESCRRLADWIRRDLPIPSVSVNLSPRQFQ 529
            HP RG+V P+EFIP+ EE GL+ ++G W L E+C++L  W +  + +P VSVNLS RQF 
Sbjct: 1196 HPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFA 1255

Query: 530  DARLVGFVRSVVESAGIPADRLELELTEGAMIGDIEKAVTILNGLKDIGVRLSIDDFGTG 589
            D +L   + +++   GIP   LELELTE  ++ D+ +A+ IL+GLK +G+ +++DDFGTG
Sbjct: 1256 DGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTG 1315

Query: 590  YSSLAYLKRFPIDTLKIDRSFVRDIVKSTTDPAIVGTIVNLAESLGFDTIAEGVETQEQA 649
            YSSL YLK+FPID LKIDRSFV  +     D  I   I+ +A SL    IAEGVE+Q Q 
Sbjct: 1316 YSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQL 1375

Query: 650  DMLRQQRCTRIQGYLISRPLPIDQFEAFLGNSVV 683
            D LR+  C  +QGYL  RP+P +QF     + V+
Sbjct: 1376 DFLREHGCDEVQGYLFGRPMPAEQFGMLYASDVL 1409



 Score = 38.5 bits (88), Expect = 2e-06
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 24/142 (16%)

Query: 79  VLSFEARVFRRDGSIIWISESARCV-RDAAGRIRYYEGTVQDIT-------ERKQHEEKI 130
           +L  + R   RDG   W     +   RD +GR+    G  +DIT         +++  + 
Sbjct: 660 LLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAKDITFTVEANNALRENGRRY 719

Query: 131 RLLATVFDSVADGILIVDPELTVQAINPAYEIMTGFQREELLRKPLVLFAPGSHEREFVD 190
           R+LA   ++++D I   D EL    ++P+ + + G+  E  L         G H+     
Sbjct: 720 RMLA---ENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLN-------GLHQTA--- 766

Query: 191 AIWTTARQAGRWQGEVTSFRHS 212
              T  RQ GR  G +   RH+
Sbjct: 767 ---TNPRQLGRLNGLLRRVRHA 785