Pairwise Alignments

Query, 575 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 563 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  291 bits (744), Expect = 6e-83
 Identities = 202/558 (36%), Positives = 298/558 (53%), Gaps = 27/558 (4%)

Query: 32  VAVLALVLAVSLVTVQGIRQVDERWNAYDLGAAAKADALSDLRGALGFGGVIHRFGDYLL 91
           V VL + +A+ L  V  +  V+               A+ ++ GA     ++     ++L
Sbjct: 18  VCVLLMSVALGLFAVDRLSTVNHAAEEIRSNWLPSVTAIGEIDGAANDYRILE--ASHIL 75

Query: 92  TGDPARAADVRQSLKSAAANLEVYRYAGELSVAE----------EKALDS---IAAAMAQ 138
              PA  A+V + + +    L   R   E  +A           E A DS   I+     
Sbjct: 76  ALYPAEMAEVEKEMTTVLNRLAEARRKYEPLLAPGWETQTFKRWEAAWDSYLKISQGKLL 135

Query: 139 MDSKLTEAEAAVAAHTPLDRLARTAALDTAPAVAAMRTLNGELTRARAALGEANRQGIAG 198
             S+  E E A   +    R     A D   A+    T +      +AA  +  R    G
Sbjct: 136 PPSRANENEKATGVYREESR----KAFDECSALINELTASNVQNATKAA--DRGRVTYVG 189

Query: 199 LTGTVLTGGSVALVLLVAI-AGLFLWFTHHRIVRPLARLAAHMQRLAGGDLDGAVPLVGR 257
               +L  G++A V ++ + AG+ +  +   + RP+  L + M RLA  DL  AV    R
Sbjct: 190 AQNWIL--GAIAFVAVLCLFAGIAMTKS---VARPIVTLTSIMDRLAKRDLGVAVEGGTR 244

Query: 258 RDEIGAMAGTVEVFRDGLVRLRAAGDRERAEAEEARRRQEALERNLRSFEAEIGTLAAAL 317
           RDEIGAMA  V+VF+DGL+        + AE E  RRR E ++  +R+F+  + ++   +
Sbjct: 245 RDEIGAMARAVQVFKDGLIEAERLTAAQAAEEENKRRRTERIDSLIRNFDGAVHSVLQTV 304

Query: 318 AGRAGTLHRTGQDLASSSSRTIGSTQEVSAAAARTAGTVQAVAAATEELSASIAGIGQRV 377
              A  L  T + +   +  T       +AAA  T+  VQ VAAA+EE++ASI  I Q+V
Sbjct: 305 GAAASQLDTTARSMTDIAEHTRAEAGSAAAAAELTSANVQTVAAASEEMAASITEISQQV 364

Query: 378 QGSVAMTTAAVEQADRSSATVASLAEAVQRIGEVVGLINAIASQTNLLALNATIEAARAG 437
             S  +   AV++ADR++ATV  L+EA QRIG+VV LI  IA+QTNLLALNATIEAARAG
Sbjct: 365 SQSAGIAGKAVDEADRTNATVQGLSEAAQRIGDVVDLIQNIAAQTNLLALNATIEAARAG 424

Query: 438 EAGKGFAVVAQEVKNLANQTARATEDITQQIATIRSATDGAVDAIQGIGGSLGQVCRMAQ 497
           EAGKGFAVVA EVK+LANQT++ATE+I QQI  I++AT GAV AI+GIG ++  +  ++ 
Sbjct: 425 EAGKGFAVVASEVKSLANQTSKATEEIAQQIGAIQAATGGAVGAIRGIGATISSINDISS 484

Query: 498 EIADAVTQQDEATREIARNIQETAGAAGAVSAAISEVAQAAEQAGMVAESMFSSAQSLGS 557
            IA A+ +Q  AT+EI+RN+Q+ A +   V++ I  V+QAA + G  A  + S++  L  
Sbjct: 485 SIAAAIEEQGAATQEISRNVQQAAQSTQEVTSNIGRVSQAATETGSAASQVMSASGDLNQ 544

Query: 558 ETKRLEGAAHSFSQALRA 575
              RL+    +F  A++A
Sbjct: 545 GAMRLKSEVENFLVAIKA 562