Pairwise Alignments

Query, 575 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 567 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  256 bits (655), Expect = 1e-72
 Identities = 195/541 (36%), Positives = 286/541 (52%), Gaps = 33/541 (6%)

Query: 26  LLSSGLVAVLALVLAVSLVTVQGIRQVDERWNAYDLGAAAKADALSDLRGALGFGGVIH- 84
           L+  G + V+ ++LAV      GI +V+E   ++ L    + +++   R A+ F G +H 
Sbjct: 14  LIGFGGMLVMTVILAVF-----GIHRVNEI--SHSLDVINEVNSVKQ-RYAINFRGSVHD 65

Query: 85  ---RFGDYLLTGDPARAADVRQSLKSAAANLEVYRYAGELSVAEEKALDSIAAAMAQM-- 139
                 D  L      A  V  ++   A +   Y+ + EL        + I A    +  
Sbjct: 66  RAIALRDVTLVTSAGDADAVVATIDKLAGD---YQRSAELMDRMFAERNDIGAEERTILG 122

Query: 140 DSKLTEAEAAVAAHTPLDRLARTAALDTAPAVAAMRTLNG-----ELTRARAALGEANRQ 194
             K TE+       T +DR  R   L+ A A+             E       L E   Q
Sbjct: 123 QIKQTESRTMPLVKTVIDR-RRAGDLEGARALLMAEARPAFVEWLERINRFIDLQENANQ 181

Query: 195 GIAGLTGTVLTG------GSVALVLLVAIAGLFLWFTHHRIVRPLARLAAHMQRLAGGDL 248
            IA  T  V  G      G  ALVL+V +A    W+T   I RPL RL A M RLA GDL
Sbjct: 182 VIAERTRAVARGFAERMIGLCALVLVVGVA--LAWWTIGSI-RPLKRLTASMLRLAEGDL 238

Query: 249 DGAVPLVGRRDEIGAMAGTVEVFRDGLVRLRAAGDRERAEAEEA-RRRQEALERNLRSFE 307
              +P+   RDE+G + G V VF+            + A AE + R+++EAL     + E
Sbjct: 239 GVDLPVARGRDEVGEIIGAVAVFKRNAQEAAELRAEQAAMAERSERQKREALGAMAATVE 298

Query: 308 AEIGTLAAALAGRAGTLHRTGQDLASSSSRTIGSTQEVSAAAARTAGTVQAVAAATEELS 367
            E   +   +A R   L+ + +D+A+S+     S+  VS +A +     + VA A EE++
Sbjct: 299 RETAQVVDEVARRTSRLNASAEDMATSAQTVSASSDSVSTSARKALSNAETVAGAAEEMT 358

Query: 368 ASIAGIGQRVQGSVAMTTAAVEQADRSSATVASLAEAVQRIGEVVGLINAIASQTNLLAL 427
           ASI  I +++  + A+T  A      +  TVASL  AV+RIGEV  LI  IA QTNLLAL
Sbjct: 359 ASIREILRQMDNTTALTAQAARTGQTAETTVASLQAAVERIGEVATLIGTIAGQTNLLAL 418

Query: 428 NATIEAARAGEAGKGFAVVAQEVKNLANQTARATEDITQQIATIRSATDGAVDAIQGIGG 487
           NATIE+ARAG+AGKGFAVVAQEVKNLANQT R+TE+IT+QIA ++SAT  A +A++ + G
Sbjct: 419 NATIESARAGDAGKGFAVVAQEVKNLANQTGRSTEEITRQIAEVQSATRAAAEAVKAMIG 478

Query: 488 SLGQVCRMAQEIADAVTQQDEATREIARNIQETAGAAGAVSAAISEVAQAAEQAGMVAES 547
            +  + +++  +A AV +QD+AT EIAR++ ETA A+  V+  I +VA+ A+  G+ A++
Sbjct: 479 DIRTIDQVSASVASAVREQDQATAEIARSVAETAAASSEVTERIDDVAREADANGLRAQA 538

Query: 548 M 548
           +
Sbjct: 539 V 539



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 494 RMAQEIADAVTQQDEATREIARNIQETAGAAGAVSAAISEVAQAAEQAGMVAESMFSSAQ 553
           R A     +V  +  A R++   +  +AG A AV A I ++A   +++  + + MF+   
Sbjct: 54  RYAINFRGSVHDRAIALRDVT--LVTSAGDADAVVATIDKLAGDYQRSAELMDRMFAERN 111

Query: 554 SLGSETKRLEG 564
            +G+E + + G
Sbjct: 112 DIGAEERTILG 122