Pairwise Alignments

Query, 575 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 563 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  262 bits (670), Expect = 2e-74
 Identities = 163/399 (40%), Positives = 238/399 (59%), Gaps = 7/399 (1%)

Query: 177 LNGELTRARAALGEANRQGIAGLTGTVLTGGSVALVLLVAIAGLFLWFTHHRIVRPLARL 236
           LN +      AL EA       +  T+L       VL VA   +  +     I + +A +
Sbjct: 171 LNKKGADQSTALAEATYSSAVTIVVTIL-------VLAVAFGFIASYLVIRDISQGIASI 223

Query: 237 AAHMQRLAGGDLDGAVPLVGRRDEIGAMAGTVEVFRDGLVRLRAAGDRERAEAEEARRRQ 296
            A MQ L  G+L   VP  G   EIGAMA ++++F++ L+  R A      EAEE   R 
Sbjct: 224 IAPMQALGQGNLAAEVPHRGEPTEIGAMADSLQIFKEALIAKREADQAAAREAEEKIARG 283

Query: 297 EALERNLRSFEAEIGTLAAALAGRAGTLHRTGQDLASSSSRTIGSTQEVSAAAARTAGTV 356
           + ++   R FEA I  +   ++  +  L  +   L S++ R+      V+AA+   +  V
Sbjct: 284 QRVDAATRQFEAAISEIVETVSSASTELEASAGTLTSTADRSQELATSVAAASEEASTNV 343

Query: 357 QAVAAATEELSASIAGIGQRVQGSVAMTTAAVEQADRSSATVASLAEAVQRIGEVVGLIN 416
           Q+VA+ATEE+S+SI  I ++VQ S  + + AV+QA +++A+V  L+EA  RIG+VV LIN
Sbjct: 344 QSVASATEEMSSSITEISRQVQESSRIASEAVDQARKTNASVGDLSEAAARIGDVVELIN 403

Query: 417 AIASQTNLLALNATIEAARAGEAGKGFAVVAQEVKNLANQTARATEDITQQIATIRSATD 476
            IA QTNLLALNATIEAARAGEAG+GFAVVA EVK LA QTA+AT +I Q I+ I+SAT+
Sbjct: 404 TIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTAKATGEIGQHISGIQSATN 463

Query: 477 GAVDAIQGIGGSLGQVCRMAQEIADAVTQQDEATREIARNIQETAGAAGAVSAAISEVAQ 536
            +V AI+ IG ++G++  ++  IA AV +Q  AT+EI+RN+Q+ A     VS+ I++V +
Sbjct: 464 ESVHAIREIGQTIGRMSEISSAIAAAVEEQGAATQEISRNVQQAAHGTQQVSSNITDVQR 523

Query: 537 AAEQAGMVAESMFSSAQSLGSETKRLEGAAHSFSQALRA 575
            A + G  +  + S+AQSL  E+ RL+     F   +RA
Sbjct: 524 GATETGSASAQVLSAAQSLSQESSRLKIEVTRFLDTVRA 562



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 4/195 (2%)

Query: 284 RERAEAEEARRRQEALERNLRSFEAEIGTLAAALAGRAGTLHRTGQDLASSSSRTIGSTQ 343
           R  +EA +  R+  A   +L    A IG +   +   AG  +    +    ++R   + +
Sbjct: 369 RIASEAVDQARKTNASVGDLSEAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGR 428

Query: 344 EVSAAAARTAGTVQAVAAATEELSASIAGIGQRVQGSVAMTTAAVEQADRSSATVASLAE 403
             +  AA      +  A AT E+   I+GI      SV       +   R S   +++A 
Sbjct: 429 GFAVVAAEVKALAEQTAKATGEIGQHISGIQSATNESVHAIREIGQTIGRMSEISSAIAA 488

Query: 404 AVQRIG----EVVGLINAIASQTNLLALNATIEAARAGEAGKGFAVVAQEVKNLANQTAR 459
           AV+  G    E+   +   A  T  ++ N T     A E G   A V    ++L+ +++R
Sbjct: 489 AVEEQGAATQEISRNVQQAAHGTQQVSSNITDVQRGATETGSASAQVLSAAQSLSQESSR 548

Query: 460 ATEDITQQIATIRSA 474
              ++T+ + T+R+A
Sbjct: 549 LKIEVTRFLDTVRAA 563