Pairwise Alignments

Query, 875 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 838 a.a., Diguanylate cyclase/phosphodiesterase with PAS/PAC domain from Azospirillum brasilense Sp245

 Score =  385 bits (990), Expect = e-111
 Identities = 227/576 (39%), Positives = 327/576 (56%), Gaps = 24/576 (4%)

Query: 305 RRLGESERRYAMAAAATNDGLWDWDLESGDFYLSARLRQMLHLPADSGDPGLAALLAHIH 364
           +RL +SE RYA+AAA  NDGLWDW L++   Y S R   ML    DS    +      +H
Sbjct: 264 QRLLQSEERYALAAAGANDGLWDWRLDTDQVYYSPRWAAMLGFAVDSLSNRIGEWFDRVH 323

Query: 365 PDDRHAVLAAIRQGEHGADGASFDVEFRVLPPNPKPDGPTPEDATRWLHLHGIVAAGPDG 424
           PDD   +  A      G +       FR+            +    W+ + G+      G
Sbjct: 324 PDDLAGLRTAFDLHLTG-EREHLQHVFRI---------QAADGDELWMLVRGLAVRDGSG 373

Query: 425 RSARLAGSAADVSDRKSYEARLVHQATHDFLTGLPNRAYLIHWL-----RGSRAAEGIGR 479
           R+ R+AGS  D++ +K  E +L+  A HD +TGLPNR  L+  +     R  RA    G 
Sbjct: 374 RAVRIAGSMTDITAQKRAEQQLLFDAFHDGMTGLPNRTLLLDRIGQALDRNRRA----GG 429

Query: 480 SDLALLFLDLDGFKVVNDSLGHAVGDRVLVATAERIAGLMEAGEFVVRLGGDEFVVAVPS 539
              A++F+DLD FK +ND+LG +VGDR+L   AER+      G+ + RL  DEF V +  
Sbjct: 430 KAFAVIFVDLDRFKSINDALGSSVGDRLLKTIAERLDETRRMGDTLARLSADEFAVLLDG 489

Query: 540 GREA--AIARAQGLETAFQRPLCVGGMELRVGLSIGLAVDDGTSDDPDGLLRDADIALYR 597
             +   A++ A+ +  A  RPL + G +L +  SIG+A+     D  + +LRDA +A+YR
Sbjct: 490 IDDVGDALSAAERMGEAVARPLALDGHDLVLSASIGIALSVSGYDRAEEMLRDASLAMYR 549

Query: 598 AKEHGKGRTVLFDASLREAILIRSRLQRDLTPSLEAGDIFLVYQPIVSLPDGRLTGFEAL 657
           AK  G+ R  +FD++LR   + + R + DL  +LE   + L YQPIV+L  G++ GFEAL
Sbjct: 550 AKSGGRARIDVFDSNLRRQAMAQMRTETDLRMALEQDQLVLYYQPIVALSSGQIAGFEAL 609

Query: 658 VRWRHPDLGPVSPAQFIPIAEETGQILPLGRHVLERAVEQLGRWR-RMAGGAALTVNVNL 716
           +RW+HP+ G V P +FIP+AEE+G I+P+GR  L  A  QLG+W+ R      L ++VN+
Sbjct: 610 MRWKHPERGLVPPGEFIPLAEESGLIVPMGRWALRVAARQLGQWQARFPRSTPLFMSVNV 669

Query: 717 SARQMWDERYVDDMLAFLAGGRA--DGLKVEVTESMTVADHDQARAILERFHALGVALCM 774
           S+RQ  D+  +  +   L   R     LK+E+TES+ + D  + R +++    + V L +
Sbjct: 670 SSRQFSDDDLIGLVSEVLQESRVPPSSLKLEITESLLMKDPAKCRVLMQGIRDMDVRLSI 729

Query: 775 DDFGTGYSSLSHLGSLPFDIVKIDKSFVSALGSDPRQESLLRGIVELAHRIGLEVVAEGV 834
           DDFGTGYSSLS+L   P D +KID+SFV A+ S     ++++ I  LA  +G++ VAEGV
Sbjct: 730 DDFGTGYSSLSYLHKFPADTLKIDRSFVQAISSGEGNAAIVQVIATLAAILGMDAVAEGV 789

Query: 835 ETEEERAVLTRIGCDYAQGYLFARPLSVADAEALLL 870
           ETE E   L  I C YAQGYL+ARP      EALLL
Sbjct: 790 ETEMESEFLRDIMCKYAQGYLYARPAPADAIEALLL 825



 Score = 95.1 bits (235), Expect = 2e-23
 Identities = 57/142 (40%), Positives = 76/142 (53%), Gaps = 11/142 (7%)

Query: 306 RLGESERRYAMAAAATNDGLWDWDLESGDFYLSARLRQMLHLPADSGDPGLAALLAHIHP 365
           +L +SE RYA+AAAA+NDGLWDWDL++G  Y S R   +L L   S        +  +H 
Sbjct: 137 QLRKSEERYALAAAASNDGLWDWDLDAGTAYYSPRWLSLLGLEEGSIGNSPDEWMERVHS 196

Query: 366 DDRHAVLAAIRQGEHGADGASFDVEFRVLPPNPKPDGPTPEDATRWLHLHGIVAAGPDGR 425
           DDR ++  A+     G +   F +E+RV       DG       RW+   GI      GR
Sbjct: 197 DDRRSLREAL--DALGGENTVFQIEYRV----HHADG-----GIRWMACRGIAVLDAQGR 245

Query: 426 SARLAGSAADVSDRKSYEARLV 447
             RL GS ADV+DRK+ E RL+
Sbjct: 246 PVRLVGSQADVTDRKTAEQRLL 267



 Score = 77.0 bits (188), Expect = 4e-18
 Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 4/141 (2%)

Query: 307 LGESERRYAMAAAATNDGLWDWDLESGDFYLSARLRQMLHL-PADSGDPGLAALLAHIHP 365
           L  +  RY +A  A ++G+WDWDL +   +LS R ++ L L P +   P     L H+HP
Sbjct: 1   LSSTIERYLLAEKAGSEGVWDWDLRNDTMFLSPRFKEFLGLPPGEINRP--EDWLDHVHP 58

Query: 366 DDRHAVLAAIRQGEHGADGASFDVEFRVLPPNPKPDGPTPEDATRWLHLHGIVAAGPDGR 425
           DD   + A+  +G+       F +E RV            +   RWL   G+      G 
Sbjct: 59  DDIDWLYASF-EGQMVGVSLPFQIEHRVRRAGAGLSPDNGDSGWRWLVCRGMAVPDESGD 117

Query: 426 SARLAGSAADVSDRKSYEARL 446
             RL GS AD++DRK  EA+L
Sbjct: 118 PVRLVGSVADITDRKHAEAQL 138