Pairwise Alignments

Query, 875 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 1009 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  303 bits (777), Expect = 3e-86
 Identities = 185/469 (39%), Positives = 273/469 (58%), Gaps = 18/469 (3%)

Query: 406 EDATRWLHLHGIVAAGPDGRSARLAGSAADVSDRKSYEARLVHQATHDFLTGLPNRAYLI 465
           E+   WL ++ I     DG+  R     +D++D+K  E  +  QA +D LTGLPNR  L+
Sbjct: 539 EEYVIWLTINTI--KDKDGQPYRRVALFSDITDKKQSEHLIWKQANYDTLTGLPNRRMLL 596

Query: 466 HWLRGSRAAEGIGRSDLALLFLDLDGFKVVNDSLGHAVGDRVLVATAERIAGLMEAGEFV 525
            +L     +    R+  AL+FLDLD FK VND+LGHA+GD +L+ TA R+   +   + V
Sbjct: 597 EYLGAEIKSADRNRNHFALMFLDLDYFKEVNDTLGHAMGDLLLIETASRLKSCVRDADVV 656

Query: 526 VRLGGDEFVVAVPSGRE-AAIAR-AQGLETAFQRPLCVGGMELRVGLSIGLAV--DDGTS 581
            RLGGDEF V + S  +   I R A+ +      P  +G     +  SIG+ +  DD TS
Sbjct: 657 ARLGGDEFTVVLSSMVDHKGIERVAEHILRRIAEPYVLGEETAYISASIGITLYPDDATS 716

Query: 582 DDPDGLLRDADIALYRAKEHGKGRTVLFDASLREAILIRSRLQRDLTPSLEAGDIFLVYQ 641
            +  GLL+ AD A+Y AK+ G+ R   F  S++E    R RL +DL  ++ + +  L YQ
Sbjct: 717 IE--GLLKHADQAMYAAKDQGRNRFNYFTPSMQEYAKYRMRLIQDLRQAVVSKEFELHYQ 774

Query: 642 PIVSLPDGRLTGFEALVRWRHPDLGPVSPAQFIPIAEETGQILPLGRHVLERAVEQLGRW 701
           PIV++  G +   EAL+RW HP+ G VSPA+FIP+AE+TG I+ +G  V E+A  Q   W
Sbjct: 775 PIVTMTTGEVLKAEALLRWFHPERGYVSPAEFIPVAEDTGLIVEIGNWVFEQAARQSALW 834

Query: 702 RRMAGGAALTVNVNLSARQMWDE-RYVDDMLAFLA--GGRADGLKVEVTESMTVADHDQA 758
           R+  G   + ++VN S  Q  DE   + + L  L        G+ VE+TE + +   D +
Sbjct: 835 RKTFG-VDIQISVNKSPIQFRDEGTLLHNWLELLQKLDVTGTGVCVEITEGLLL---DAS 890

Query: 759 RAILERFHAL---GVALCMDDFGTGYSSLSHLGSLPFDIVKIDKSFVSALGSDPRQESLL 815
             + E+  A    GV + +DDFGTGYSSL++L     D +KID+SF   + +D   ++L 
Sbjct: 891 MGVTEKLLAYRDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNIDTDESDQTLC 950

Query: 816 RGIVELAHRIGLEVVAEGVETEEERAVLTRIGCDYAQGYLFARPLSVAD 864
             I+ +AH++G++V+AEGVETE +R VL   GCDY QGYLF++P+S  +
Sbjct: 951 EAIIVMAHKLGMKVIAEGVETEAQRQVLLTAGCDYGQGYLFSKPVSATE 999



 Score = 40.0 bits (92), Expect = 7e-07
 Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 21/198 (10%)

Query: 305 RRLGESERRYAMAAAATNDGLWDWDLESGDFYLSARLRQMLHLPADSGDPGLAALLAHIH 364
           R +  S  +  +  ++++ G+WDWD+ +     +AR   +L    D  +      +  I 
Sbjct: 323 REVLASREQLELVLSSSDLGVWDWDIRNDHIERNARSADILGCDIDMLNANSRQWMDSIV 382

Query: 365 PDDRHAVLAAIRQGEHGADGASFDVEFRVLPPNPKPDGPTPEDATRWLHLHG-IVAAGPD 423
            +DR  VL +I     G +     +E+R+          T     RW+   G +V+   +
Sbjct: 383 AEDRPKVLHSIEAHIRG-ETLQHKMEYRL---------KTLNRDIRWILDTGKVVSRDAN 432

Query: 424 GRSARLAGSAADVSDRKSYE-----ARLVHQATHDFLTGLPNRAYLIHWLRGSRAAEGIG 478
             + R+ G+  D+++ K  E     + LV+  + + ++ L     +I       A  G  
Sbjct: 433 NNALRMCGTYTDITEAKLIEESLKLSALVYDNSSEAMSVLDETGVIITVNAAFTAITGYS 492

Query: 479 RSD-----LALLFLDLDG 491
            S+     + LL+ DL+G
Sbjct: 493 ESEIRGQHIRLLYCDLNG 510