Pairwise Alignments
Query, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Subject, 646 a.a., Histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004
Score = 315 bits (808), Expect = 6e-90
Identities = 236/665 (35%), Positives = 332/665 (49%), Gaps = 63/665 (9%)
Query: 637 ILLADDNADMRSYVERLLTAAGYRVETVGDGVAAVETAKAAPPDLVLSDVMMPHLDGFGV 696
IL+ DDNA R V R+L + VE G G + A V+ DV +P + GF +
Sbjct: 9 ILVVDDNAVTRYSVRRVLEHHQFVVEEAGTGGEGLVRLAAEAFAAVVLDVNLPDMSGFDI 68
Query: 697 IAALRGHPHTRDLPIILLSARA-GEESSIEGLQAGADDYLVKPFSARELLARVEGALRLA 755
+ LR P T LP++ +SA + I GL AGAD YL+ P L+A + LR
Sbjct: 69 VRTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLVATLRTLLRA- 127
Query: 756 ELRRETAEQLRQANEALERRVEERTRERDRFWRLSRDPFLVADREGRWLSASPAWTEILG 815
R A EAL R+ E R R+ F + P V D + A+ A+ ++G
Sbjct: 128 ----------RNAEEAL--RLSE-ARFREIFEHIGA-PIAVVDAQLHTQEANAAFQRLIG 173
Query: 816 W-TEAEMLGRTSEWMEHPDDCDKTRREVRKLAGGGSTFRFENRFRT-RGGHYRDFAWTAT 873
T E + + D C + L G R+ R G R+ W +
Sbjct: 174 SATPCEAIN-----VPGLDQCATVQALTAAL---GRRERWSGTLSILRDGAVRETEWRVS 225
Query: 874 PADE--LMFCVARDVTEEKERA------------------ATLRKTEEQLRQSQKMEAVG 913
P E L DVTE++ R A ++TE QL Q+QKMEA+G
Sbjct: 226 PYREPDLGLLFVEDVTEQRLREREQRQELDTATSELAHQIAERQRTEIQLLQAQKMEALG 285
Query: 914 QLTGGMAHDFNNLLQAMSSCLQLV-----SRRVGHAPEVEPILDAGRQAVDRGASLIRQL 968
+LTGG+AHDFNNLL ++ S L ++ S R+ P + I + R A+L +++
Sbjct: 286 KLTGGIAHDFNNLLTSIISGLDMIQLAVESNRIERVPRLAEIATG---SAHRAAALTQRM 342
Query: 969 MAFSRRQSLQPEAFDVRDRLLGLRLFLDRALRADIGLEFALQGGLWPVMADPVQFDLAVL 1028
+AF+R+QSL + FDV R+ L L R++ +I LE L +AD Q + VL
Sbjct: 343 LAFARKQSLDAQPFDVNARVRSLEDMLRRSIGENIALELQLAEAPLVAIADANQLENVVL 402
Query: 1029 NLATNARDAIDADGAV-VVGADNVVLDGMDGLSGEFLKVFVRDSGRGIAPDALGRVFEPF 1087
NL NARDA+ G + + A + + + G+++ V V D G GI P L +VFEPF
Sbjct: 403 NLVINARDALQGHGTIRIQSAPHTAYNDPELEDGDYVAVNVIDDGSGIDPAILSQVFEPF 462
Query: 1088 FTTKAVGKGTGLGLAQVYGFCRQSGGTATVESVEGKGTVVSLLLPRAEATVASETPNAPP 1147
FTTK +G+GTGLGL+ YGF RQSGGTA + S G GT V+LLLPR TV P PP
Sbjct: 463 FTTKPIGEGTGLGLSMTYGFARQSGGTARITSTLGSGTTVALLLPRG-LTVGEALPPPPP 521
Query: 1148 VLPSAADIHVLLVEDDPVVAPVVTAALEDLGYRVTRAATGEEALRRLE-EAAVDLLFSDV 1206
P +LLV+D VV +V+ L D GY V A + AL +L +A +D++ SDV
Sbjct: 522 NAPRGRSQRILLVDDTDVVRMMVSEVLSDAGYHVIEAENADGALAQLRADAQIDMVVSDV 581
Query: 1207 VMPGSINGVALAQEARQRWPDLGILLTTGYSEDLAA-----TKSVRVLSKPYRIEDLAHA 1261
+PG +NG +A AR P L IL TGY+E+ A + + +L KP+ + DL +
Sbjct: 582 GLPG-MNGRDMADVARDLRPGLPILFITGYAENAATRQEFLAEGMALLPKPFSLNDLLNT 640
Query: 1262 IQEEL 1266
+ L
Sbjct: 641 VSRML 645
Score = 79.3 bits (194), Expect = 1e-18
Identities = 108/437 (24%), Positives = 170/437 (38%), Gaps = 76/437 (17%)
Query: 334 ERRRAE---MLAELDRAKTAFFSNASHEFRTPLTLMLGPVEDMLQRSPAEDRAAVPVER- 389
ER+R E + A+ A +H+F LT ++ + DM+Q + +R +ER
Sbjct: 267 ERQRTEIQLLQAQKMEALGKLTGGIAHDFNNLLTSIISGL-DMIQLAVESNR----IERV 321
Query: 390 -DALELVHRNGQRLLRLVNALLDVSRIEAGRMKARFEPVDLAAFTAELASSFRSAMDRAG 448
E+ + R L +L +R + +P D+ A L R ++
Sbjct: 322 PRLAEIATGSAHRAAALTQRMLAFAR----KQSLDAQPFDVNARVRSLEDMLRRSIGE-N 376
Query: 449 LDYRIDCPPLPEPVWIDRDLWEKIVLNLISNAFKYTLSGGVAVAVQPV------------ 496
+ + P D + E +VLNL+ NA + L G + +Q
Sbjct: 377 IALELQLAEAPLVAIADANQLENVVLNLVINA-RDALQGHGTIRIQSAPHTAYNDPELED 435
Query: 497 GERAVLTVRDTGVGIPAEEQPRVFDRFHRIEGQSGRTHEGTGIGLALVKDLTQLHGGTVA 556
G+ + V D G GI +VF+ F + EGTG+GL++ + GGT
Sbjct: 436 GDYVAVNVIDDGSGIDPAILSQVFEPFFTTKPIG----EGTGLGLSMTYGFARQSGGTAR 491
Query: 557 LDSDVGRGSTFTVTLPFGNAHVPATERPAGPIPASTATRADAFVAEALHWLPQEQGEQSA 616
+ S +G G+T + LP G V EAL P
Sbjct: 492 ITSTLGSGTTVALLLPRG-----------------------LTVGEALPPPP-------- 520
Query: 617 PALVDGASSGPAPERMRNATILLADDNADMRSYVERLLTAAGYRVETVGDGVAAVETAKA 676
P R R+ ILL DD +R V +L+ AGY V + A+ +A
Sbjct: 521 ----------PNAPRGRSQRILLVDDTDVVRMMVSEVLSDAGYHVIEAENADGALAQLRA 570
Query: 677 -APPDLVLSDVMMPHLDGFGVIAALRGHPHTRDLPIILLSARAGEESSIEGLQAGADDYL 735
A D+V+SDV +P ++G + R LPI+ ++ A ++ + A L
Sbjct: 571 DAQIDMVVSDVGLPGMNGRDMADVAR--DLRPGLPILFITGYAENAATRQEFLAEGMALL 628
Query: 736 VKPFSARELLARVEGAL 752
KPFS +LL V L
Sbjct: 629 PKPFSLNDLLNTVSRML 645