Pairwise Alignments

Query, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 525 a.a., histidine kinase from Herbaspirillum seropedicae SmR1

 Score =  264 bits (675), Expect = 1e-74
 Identities = 179/506 (35%), Positives = 273/506 (53%), Gaps = 32/506 (6%)

Query: 789  LSRDPFLVADR---EGRWLSASPAWTEILGWTEAEMLGRTSEWMEHPDDCDKTRREVRKL 845
            ++R P +V+D    +   +  + A+  + G++ AE++G+   +++ P+       EVR+ 
Sbjct: 24   MTRMPMIVSDPNRPDNPIVFVNNAFINMTGYSSAEVVGKNCRFLQGPETDRSVVAEVRRA 83

Query: 846  AGGGSTFRFEN-RFRTRGGHYRDFAWTATPADE-----LMFCVARDVTEEKERAATLRKT 899
                     E   +R  G  + +  + +   D+       F    D++  ++        
Sbjct: 84   VAERREIATELLNYRKNGSTFWNALFISPVYDQQGNLKYFFSSQLDISRRRD-------A 136

Query: 900  EEQLRQSQKMEAVGQLTGGMAHDFNNLLQAMSSCLQLVSRRV-GHAPEVEPIL---DAGR 955
            E+ L Q++KMEA+GQLTGG+AHDFNNLLQ ++  L +++  +    P++  +    D+ R
Sbjct: 137  EQALGQARKMEALGQLTGGIAHDFNNLLQVITGYLDMINLALRSDKPDLARVARSADSIR 196

Query: 956  QAVDRGASLIRQLMAFSRRQSLQPEAFDVRDRLLGLRLFLDRALRADIGLEFALQGGLWP 1015
            +A  + A L +QL+AF+R+Q L+    ++     G    + R L  DI ++  L  GLW 
Sbjct: 197  KASGKAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVSRTLGGDITVQTELARGLWN 256

Query: 1016 VMADPVQFDLAVLNLATNARDAIDADGAVVVGADNVVLDGMD-----GLS-GEFLKVFVR 1069
               DP Q ++A+LN+  NARDA++  G V +   N  L   D     GL  G ++ + V 
Sbjct: 257  CRLDPTQMEVALLNVLINARDAMNGRGRVRIRTANEDLADPDRAVQLGLKEGLYVSIAVT 316

Query: 1070 DSGRGIAPDALGRVFEPFFTTKAVGKGTGLGLAQVYGFCRQSGGTATVESVEGKGTVVSL 1129
            D G GIAPD L RV +PFFTTK  GKGTGLGL+ VYGF +QSGG+  + S    GT V++
Sbjct: 317  DDGPGIAPDILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRITSGAEGGTTVTI 376

Query: 1130 LLPRAEATVASETPNAPPVLPSAADIHVLLVEDDPVVAPVVTAALEDLGYRVTRAATGEE 1189
              P  +  V                 H+L+V+D   VA +    LE LGYRV+   +  E
Sbjct: 377  YFPATQDQVGGGFEYDNRSQSQGGQEHILVVDDRLEVAELAQTMLESLGYRVSMVNSPAE 436

Query: 1190 ALRRLEEA-AVDLLFSDVVMPGSINGVALAQEARQRWPDLGILLTTGY-SEDL---AATK 1244
            AL+ +     VDLLF+D++MPGS+NGV LA+EA++  P + +LLTTGY SE L    A  
Sbjct: 437  ALQLIRSGRPVDLLFTDLIMPGSMNGVVLAREAKRMLPTIKVLLTTGYASESLERHGADG 496

Query: 1245 SVRVLSKPYRIEDLAHAIQEELEDGA 1270
               VL KPYR ++LA  I+  L DGA
Sbjct: 497  EFPVLDKPYRHDELARKIRIVL-DGA 521



 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 101/446 (22%), Positives = 169/446 (37%), Gaps = 90/446 (20%)

Query: 327 NAEAYEEERRRAEMLAELDRAKTAFFSNASHEFRTPLTLMLGPVE--DMLQRSPAEDRAA 384
           +AE    + R+ E L +L           +H+F   L ++ G ++  ++  RS   D A 
Sbjct: 135 DAEQALGQARKMEALGQLT-------GGIAHDFNNLLQVITGYLDMINLALRSDKPDLAR 187

Query: 385 VPVERDALELVHRNGQRLLRLVNALLDVSRIEAGRMKARFEPVDLAAFTAELASSFRSAM 444
           V    D++         L + + A     R+E   +               L   F   +
Sbjct: 188 VARSADSIRKASGKAAMLTQQLLAFARKQRLEGRTINLN-----------SLTEGFTDLV 236

Query: 445 DRA-GLDYRIDCPPLPEPVW---IDRDLWEKIVLNLISNAFKYTLSGGVAVAVQPVGE-- 498
            R  G D  +    L   +W   +D    E  +LN++ NA +  ++G   V ++   E  
Sbjct: 237 SRTLGGDITVQTE-LARGLWNCRLDPTQMEVALLNVLINA-RDAMNGRGRVRIRTANEDL 294

Query: 499 ----RAV-----------LTVRDTGVGIPAEEQPRVFDRFHRIEGQSGRTHEGTGIGLAL 543
               RAV           + V D G GI  +  PRV D F   + +     +GTG+GL++
Sbjct: 295 ADPDRAVQLGLKEGLYVSIAVTDDGPGIAPDILPRVMDPFFTTKDEG----KGTGLGLSM 350

Query: 544 VKDLTQLHGGTVALDSDVGRGSTFTVTLPFGNAHVPATERPAGPIPASTATRADAFVAEA 603
           V    +  GG+V + S    G+T T+       + PAT+   G            F  + 
Sbjct: 351 VYGFVKQSGGSVRITSGAEGGTTVTI-------YFPATQDQVG----------GGFEYDN 393

Query: 604 LHWLPQEQGEQSAPALVDGASSGPAPERMRNATILLADDNADMRSYVERLLTAAGYRVET 663
                Q QG Q                      IL+ DD  ++    + +L + GYRV  
Sbjct: 394 ---RSQSQGGQE--------------------HILVVDDRLEVAELAQTMLESLGYRVSM 430

Query: 664 VGDGVAAVETAKAA-PPDLVLSDVMMPHLDGFGVIAALRGHPHTRDLPIILLSARAGEES 722
           V     A++  ++  P DL+ +D++MP     GV+ A         + ++L +  A E  
Sbjct: 431 VNSPAEALQLIRSGRPVDLLFTDLIMPGSMN-GVVLAREAKRMLPTIKVLLTTGYASESL 489

Query: 723 SIEGLQAGADDYLVKPFSARELLARV 748
              G   G    L KP+   EL  ++
Sbjct: 490 ERHGAD-GEFPVLDKPYRHDELARKI 514