Pairwise Alignments
Query, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Subject, 803 a.a., PAS domain S-box-containing protein from Paraburkholderia graminis OAS925
Score = 276 bits (705), Expect = 7e-78
Identities = 185/522 (35%), Positives = 266/522 (50%), Gaps = 34/522 (6%)
Query: 773 ERRVEERTRERDRFWRLSRD-----PFLVADREGRWLSASPAWTEILGWTEAEMLGRTSE 827
++ V + E +R +RL D + EGR + + I G+ E++G
Sbjct: 129 KKAVHDAVLESERRFRLLVDGVTDYAIFMLSPEGRVTNWNSGAHRIKGYAANEIIGSHFS 188
Query: 828 WMEHPDDCDKTRREVRKLAGGGSTFRFEN---RFRTRGGHYRDFAWTATPADELMFC--- 881
P+D + + R L RFE+ R R G + W D +
Sbjct: 189 RFYTPEDAARGLPQ-RGLEAAARDGRFESEGWRVRKNGSRF----WAHVVIDAIRHNGTL 243
Query: 882 -----VARDVTEEKERAATLRKTEEQLRQSQKMEAVGQLTGGMAHDFNNLLQAMSSCLQL 936
+ RD+TE E L +T L QSQKMEA+G+LTGG+AHDFNN++Q + L+L
Sbjct: 244 VGFAKITRDITERMEATRLLEETRVALVQSQKMEAIGKLTGGVAHDFNNVMQILRGNLEL 303
Query: 937 VSRRVGHAPEVEPILDAGRQAVDRGASLIRQLMAFSRRQSLQPEAFDVRDRLLGLRLFLD 996
+ R LD AV+RGA L QL+AF R+Q L+P ++ + G+ L
Sbjct: 304 LESRHKRDGWTRERLDKAIDAVERGAKLASQLLAFGRQQPLRPIVINLASAIRGMDDLLR 363
Query: 997 RALRADIGLEFALQGGLWPVMADPVQFDLAVLNLATNARDAIDADGAVVVGADNVVLDGM 1056
RAL + +E + GGLW + D Q + +LNLA NARDA+ G + + N +LD
Sbjct: 364 RALGETVEIETVVAGGLWNTLVDVHQMENVILNLAINARDAMKEGGKLTMEVSNAMLDDH 423
Query: 1057 ------DGLSGEFLKVFVRDSGRGIAPDALGRVFEPFFTTKAVGKGTGLGLAQVYGFCRQ 1110
D +G+++ + V DSG G+ P+ + R F+PFFTTK G+GTGLGL+ YGF +Q
Sbjct: 424 YVAGFPDVPAGQYVMLAVTDSGTGMPPEVVQRAFDPFFTTKPEGEGTGLGLSMAYGFVKQ 483
Query: 1111 SGGTATVESVEGKGTVVSLLLPRAEATVASETPNAPPVLPSAADIHVLLVEDDPVVAPVV 1170
SGG + S G GT V + LPR+ A E P + PV +L+VEDD V V
Sbjct: 484 SGGHIRIYSEVGHGTTVKIYLPRS-MEEAVEAPVSQPVTLLGGTETILVVEDDKDVQSTV 542
Query: 1171 TAALEDLGYRVTRAATGEEALRRLEEAA-VDLLFSDVVMPGSINGVALAQEARQRWPDLG 1229
L LGY V +A E+AL + +DLLF+DVVMPG + A+ +A Q P L
Sbjct: 543 VDTLSGLGYSVLKANEAEQALAVVRSGVHIDLLFTDVVMPGPLRSPAMVAQAVQMLPRLK 602
Query: 1230 ILLTTGYSEDLAA-----TKSVRVLSKPYRIEDLAHAIQEEL 1266
+L T+GY+++ V +LSKPY E LA+ I++ L
Sbjct: 603 VLFTSGYTQNAIVHGGRLDPGVELLSKPYSREQLAYKIRQIL 644
Score = 72.4 bits (176), Expect = 1e-16
Identities = 108/466 (23%), Positives = 186/466 (39%), Gaps = 93/466 (19%)
Query: 333 EERRRAEMLAELDRAKTAFFSNASHEFRTPLTLMLGPVEDMLQRSPAEDRAAVPVERDAL 392
EE R A + ++ A +H+F + ++ G +E + R + +++ A+
Sbjct: 264 EETRVALVQSQKMEAIGKLTGGVAHDFNNVMQILRGNLELLESRHKRDGWTRERLDK-AI 322
Query: 393 ELVHRNGQRLLRLVNALLDVSRIEAGRMKARFEPVDLAAFTAELASSFRSAMD--RAGLD 450
+ V R +L + LL R + L LAS+ R D R L
Sbjct: 323 DAVERGA----KLASQLLAFGRQQP-----------LRPIVINLASAIRGMDDLLRRALG 367
Query: 451 YRIDCPPLPEP-VW---IDRDLWEKIVLNLISNAFKYTLSGG-----VAVAVQ------- 494
++ + +W +D E ++LNL NA GG V+ A+
Sbjct: 368 ETVEIETVVAGGLWNTLVDVHQMENVILNLAINARDAMKEGGKLTMEVSNAMLDDHYVAG 427
Query: 495 ----PVGERAVLTVRDTGVGIPAEEQPRVFDRFHRIEGQSGRTHEGTGIGLALVKDLTQL 550
P G+ +L V D+G G+P E R FD F + + EGTG+GL++ +
Sbjct: 428 FPDVPAGQYVMLAVTDSGTGMPPEVVQRAFDPFFTTKPEG----EGTGLGLSMAYGFVKQ 483
Query: 551 HGGTVALDSDVGRGSTFTVTLPFGNAHVPATERPAGPIPASTATRADAFVAEALHWLPQE 610
GG + + S+VG G+T + LP + A E P
Sbjct: 484 SGGHIRIYSEVGHGTTVKIYLP--RSMEEAVEAPV------------------------- 516
Query: 611 QGEQSAPALVDGASSGPAPERMRNATILLADDNADMRSYVERLLTAAGYRVETVGDGVAA 670
S P + G + TIL+ +D+ D++S V L+ GY V + A
Sbjct: 517 ----SQPVTLLGGTE----------TILVVEDDKDVQSTVVDTLSGLGYSVLKANEAEQA 562
Query: 671 VETAKAAPP-DLVLSDVMMP-HLDGFGVIA-ALRGHPHTRDLPIILLSARAGEESSIEG- 726
+ ++ DL+ +DV+MP L ++A A++ P + +L ++ + + + G
Sbjct: 563 LAVVRSGVHIDLLFTDVVMPGPLRSPAMVAQAVQMLPRLK----VLFTSGYTQNAIVHGG 618
Query: 727 -LQAGADDYLVKPFSARELLARVEGALRLAELRRETAEQLRQANEA 771
L G + L KP+S +L ++ L +A L R T + A
Sbjct: 619 RLDPGV-ELLSKPYSREQLAYKIRQILGVAPLVRTTNTNTNSVSNA 663