Pairwise Alignments

Query, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 887 a.a., histidine kinase from Burkholderia phytofirmans PsJN

 Score =  290 bits (741), Expect = 5e-82
 Identities = 181/407 (44%), Positives = 233/407 (57%), Gaps = 24/407 (5%)

Query: 884  RDVTEEKERA-----ATLRKTEEQLRQSQKMEAVGQLTGGMAHDFNNLLQAMSSCLQLVS 938
            R +TE  E+      A     EEQLRQ+QKMEA+G LTGG+AHDFNN+LQ ++  LQ+++
Sbjct: 304  RQLTETLEQRVADALAARALAEEQLRQAQKMEAIGSLTGGVAHDFNNVLQVINGNLQMLA 363

Query: 939  RRVGHAPEVEPILDAGRQAVDRGASLIRQLMAFSRRQSLQPEAFDVRDRLLGLRLFLDRA 998
               G  P     L A   AV RGA L   L+AF+RRQ L P   + R  L G+   L RA
Sbjct: 364  ADAGGHPATLRRLSAATDAVKRGAKLAAHLLAFARRQPLSPTVLNPRRLLSGMSEMLHRA 423

Query: 999  LRADIGLEFALQGGLWPVMADPVQFDLAVLNLATNARDAIDADGAVVVGADNVVLDGM-- 1056
            L   + ++  L   LW V AD  Q + A+LNLA NARDA+  DG + V A N VLD    
Sbjct: 424  LGETVRIDTVLNDDLWNVQADRNQLENALLNLAINARDAMQGDGTLTVRAANRVLDTTFC 483

Query: 1057 ----DGLSGEFLKVFVRDSGRGIAPDALGRVFEPFFTTKAVGKGTGLGLAQVYGFCRQSG 1112
                +   GE++   V DSG G+ P+ L RVFEPFFTTK  G GTGLGL+ V+GF RQSG
Sbjct: 484  QDKPELSPGEYVVFSVADSGAGMPPEILQRVFEPFFTTKPDGHGTGLGLSMVFGFLRQSG 543

Query: 1113 GTATVESVEGKGTVVSLLLPR---AEATVASETPNAPPVLPSAADIHVLLVEDDPVVAPV 1169
            G   +ES  G+GT VSL  PR   AE + A +   A    PS     +L+VEDD  V   
Sbjct: 544  GHTLIESEVGRGTTVSLFFPRCCEAETSEAVDDTEA----PSGGGETILVVEDDADVRLT 599

Query: 1170 VTAALEDLGYRVTRAATGEEALRRLE-EAAVDLLFSDVVMPGSINGVALAQEARQRWPDL 1228
                L  LGY+V  A++G+ A+  +E +  +DLLF+DVVMPG I  V LAQ A  R P +
Sbjct: 600  AVEMLAQLGYKVLTASSGDAAIEFIESDVPIDLLFTDVVMPGKIKSVELAQRAATRSPAV 659

Query: 1229 GILLTTGYSEDLAA-----TKSVRVLSKPYRIEDLAHAIQEELEDGA 1270
              L T+GY+ D           + +LSKPYR +DLA  ++  L  GA
Sbjct: 660  PTLFTSGYARDEIVHHGKLDAGITLLSKPYRRDDLARKVRGVLRAGA 706



 Score =  167 bits (424), Expect = 3e-45
 Identities = 201/775 (25%), Positives = 310/775 (40%), Gaps = 121/775 (15%)

Query: 14  GDMAALMRAKDWAATPFGPVETWSPALRSAIGICLGSRFPIVLYWGPTRALIYNDAWSPV 73
           G+MA  + A DWAAT  G +E W  +L + + + L S  P+VL WG    +IYNDA++  
Sbjct: 15  GEMAQRISAFDWAATGLGAIENWPRSLTATVQLLLASPVPLVLLWGKPGYMIYNDAYAVF 74

Query: 74  PGNKHPWALGRPGREVWAEIWDIIGPMFDHVMTAGEATWSEDQLLPLNRFGYVEECYFYY 133
            G +HP+ LG P    W E+ D    +    +  G  ++ + +L+ L R G  E+ +   
Sbjct: 75  AGGRHPYLLGCPVEHGWPEVADFNRHVMATCLAGGTLSYRDKELV-LLRDGKPEDVWMDL 133

Query: 134 SYSPVRGEDGRVEGIFTAVTETTQRVLAER-RERLLRGVSEATSRARSAAEACKAAVGCL 192
            YSPV  + G   G+   V ETT RVL ER R+R    + E   R + A       +G  
Sbjct: 134 YYSPVADDSGAPAGVLAVVVETTTRVLTERWRQRAEAELHETNERLQLALNT-GTVLGTW 192

Query: 193 V------TLPEESPFALAY---LRDASSGALQRVASEGLPPGGDLAPERTLPDCNPTPWP 243
           V       +  +  FA  +     +A+ G  +  A   + P      ++           
Sbjct: 193 VLDVRTGKVSGDERFARTFSFRQEEAAKGVERHAAVHMIHPDDQALNDQLT--------- 243

Query: 244 FAEALATGAPVTVEGLTLRCPGRLPGTPWPEAVEQALVVPILSARADAPHGF--LVTGIS 301
            AEA+ T  P   E    R  G      W +A  Q             P  F  ++  I 
Sbjct: 244 -AEAIRTRQPFRAEFRIRRPDG---DYIWVQANGQCEF-----DEHGEPTRFPGVLIDIH 294

Query: 302 PRRRIDAPYVTLFERAAGHIATAITNAEAYEEERRRAEMLAELDRAKTAFFSNASHEFRT 361
            R+  +     L E     +A A+      EE+ R+A+ +     A  +     +H+F  
Sbjct: 295 ERKIAEQSLRQLTETLEQRVADALAARALAEEQLRQAQKM----EAIGSLTGGVAHDFNN 350

Query: 362 PLTLMLGPVEDMLQRSPAEDRAAVPVERDALELVHRNGQRLLRLVNALLDVSRIEAGRMK 421
            L ++ G ++ +     A D    P     L       +R  +L   LL           
Sbjct: 351 VLQVINGNLQML-----AADAGGHPATLRRLSAATDAVKRGAKLAAHLLAF--------- 396

Query: 422 ARFEPVDLAAFT-AELASSFRSAMDRA-GLDYRIDCPPLPEPVW---IDRDLWEKIVLNL 476
           AR +P+         L S     + RA G   RID   L + +W    DR+  E  +LNL
Sbjct: 397 ARRQPLSPTVLNPRRLLSGMSEMLHRALGETVRID-TVLNDDLWNVQADRNQLENALLNL 455

Query: 477 ISNAFKYTLSGGVAVAVQPV-----------------GERAVLTVRDTGVGIPAEEQPRV 519
             NA +  + G   + V+                   GE  V +V D+G G+P E   RV
Sbjct: 456 AINA-RDAMQGDGTLTVRAANRVLDTTFCQDKPELSPGEYVVFSVADSGAGMPPEILQRV 514

Query: 520 FDRFHRIEGQSGRTHEGTGIGLALVKDLTQLHGGTVALDSDVGRGSTFTVTLPFGNAHVP 579
           F+ F   +        GTG+GL++V    +  GG   ++S+VGRG+T ++  P       
Sbjct: 515 FEPFFTTKPDG----HGTGLGLSMVFGFLRQSGGHTLIESEVGRGTTVSLFFP------- 563

Query: 580 ATERPAGPIPASTATRADAFVAEALHWLPQEQGEQSAPALVDGASSGPAPERMRNATILL 639
                            +A  +EA+        +  AP      S G         TIL+
Sbjct: 564 --------------RCCEAETSEAV-------DDTEAP------SGG-------GETILV 589

Query: 640 ADDNADMRSYVERLLTAAGYRVETVGDGVAAVETAKA-APPDLVLSDVMMPHLDGFGVIA 698
            +D+AD+R     +L   GY+V T   G AA+E  ++  P DL+ +DV+MP      V  
Sbjct: 590 VEDDADVRLTAVEMLAQLGYKVLTASSGDAAIEFIESDVPIDLLFTDVVMPGKIK-SVEL 648

Query: 699 ALRGHPHTRDLPIILLSARAGEESSIEGLQAGADDYLVKPFSARELLARVEGALR 753
           A R    +  +P +  S  A +E    G        L KP+   +L  +V G LR
Sbjct: 649 AQRAATRSPAVPTLFTSGYARDEIVHHGKLDAGITLLSKPYRRDDLARKVRGVLR 703



 Score = 54.3 bits (129), Expect = 5e-11
 Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 13/132 (9%)

Query: 1131 LPRAEATVA-SETPNAPPVLPSAADIHVLLVEDDPVVAPVVTAALEDLGYRVTRAATGEE 1189
            +P+ ++++A + +P  P          VLLVEDD          L  LG   T   + EE
Sbjct: 750  IPQTKSSLARARSPGTPA--------RVLLVEDDMNSREAFNDLLNALGLDCTAVGSAEE 801

Query: 1190 ALRRLEEAAVDLLFSDVVMPGSINGVALAQEARQRWPDLGILLTTGYSEDLA---ATKSV 1246
            AL  +     D+LF+D+ +PG ++G  LA+   ++ P + +LL +GY +      A    
Sbjct: 802  ALPLVPAQHFDILFTDLTLPG-MSGDCLARAMLRQQPGIRVLLVSGYGKSAQIGDAIPGA 860

Query: 1247 RVLSKPYRIEDL 1258
            R+L KP  I +L
Sbjct: 861  RLLGKPLDIAEL 872