Pairwise Alignments

Query, 238 a.a., Response regulator PleD from Azospirillum sp. SherDot2

Subject, 591 a.a., GGDEF domain-containing protein from Rhodanobacter denitrificans FW104-10B01

 Score =  135 bits (341), Expect = 1e-36
 Identities = 73/171 (42%), Positives = 100/171 (58%), Gaps = 2/171 (1%)

Query: 66  RIVEMRNRIIRLAETDSLTGAINRRCFLERARIAVGEADRHQRSLSILLLDIDHFKSVND 125
           R +  + R  R+A  D LTG +N + F+  A   +   ++      ++ +D+DHFK +ND
Sbjct: 411 RTMRSQRRFKRMAIRDGLTGILNHQHFINEADRILRLLEKKLGHACLISIDLDHFKQIND 470

Query: 126 TWGHAGGDVALTRFVEACETSLRPNDLLGRFGGEEFAVLLPETNPYVAVTIADRVRAAIE 185
           T GHA GD  L R V  C+  LRP+DL GR GGEEF +LL E +    + IA+R+R AI 
Sbjct: 471 THGHAMGDAVLKRAVAICQQHLRPSDLFGRLGGEEFGILLHECSRNQGLDIAERIRIAIG 530

Query: 186 TTNIDHNGSTFRITASIGISGIGTD--GLDAALSRADAALYAAKRTGRNRV 234
           TT I+ +G    I+AS+G++   T   GL      AD ALY AKR GRNRV
Sbjct: 531 TTPIEKDGQHIAISASVGLASTDTSGYGLQRLCKEADVALYRAKRAGRNRV 581