Pairwise Alignments

Query, 476 a.a., Multidrug export protein MepA from Azospirillum sp. SherDot2

Subject, 432 a.a., Na+ driven multidrug efflux pump from Pseudomonas fluorescens FW300-N2E2

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 85/319 (26%), Positives = 139/319 (43%), Gaps = 25/319 (7%)

Query: 39  NLFYIS-LLGERELAAAVGFAGTVLFLQSSLCIGLSIGAGALVARAIGGGRRAEAARLAG 97
           N  YI  +LG + LAA  G    V F   +L IGL  GAG L+ +A G G       +AG
Sbjct: 15  NSIYIGQMLGTQALAAVSGMFPIVFFF-IALVIGLGAGAGVLIGQAYGAGETGTVKAIAG 73

Query: 98  SSLILTALVSAAVGLLTLPLLGPAMDLLGARGATRDLAVGYLTILSPTLPLLGLGMGCSA 157
           S+L+L A++  A  +L       A+  LG      + AV Y  ++   LP+L + +  + 
Sbjct: 74  STLLLGAIIGLAAAVLGSVFARQALQGLGTPADVLEDAVSYARVMLWILPMLLIFVLFTQ 133

Query: 158 MLRAQGDARRAMTVTLYAALFTAALNPILIFSL----RLDLTGAAVT-VVLSRCLLAAVG 212
           +LR   D    M   L +      L P LI       ++ +  AA+  +V +   +A + 
Sbjct: 134 LLRGVSDTVSPMLALLTSTSVGLLLTPALIRGWLGLPQMGIQSAALAGLVGTASAMAMLA 193

Query: 213 WHGVARVHRLVAAPG---WTGLLTDS---GTLAGIAGPAVLTNLATPVAGVYVTTSMARF 266
           W    R H L  AP    +  +  D    G +  I  P  L  +   ++ + + T +   
Sbjct: 194 WRLNRREHAL--APDRALFAAMRLDMEILGKVLRIGLPTGLQMVVISLSELVILTLVNSH 251

Query: 267 GDAAIAGAAIVDRLVPVAFGTIFALTGAVGPILAQNLGAGRPDRVRATLRASLVL----- 321
           G  A A    V ++V        ++      + AQ +GAGR +R+   LR  L++     
Sbjct: 252 GSQATAAYGAVTQIVNYVQFPALSIAITASILGAQAIGAGRLERLGPILRTGLLINLWLT 311

Query: 322 ----IVVWVLAVW-LGLFL 335
               ++ ++L+ W LGLF+
Sbjct: 312 GGLVVLGYLLSHWLLGLFI 330



 Score = 25.4 bits (54), Expect = 0.004
 Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 15/70 (21%)

Query: 402 FVAVGGWLGGAPGVLIGQA------------AGSVLFGIAAVLVAFRVTGRLGRSGGGPA 449
           F+A+   LG   GVLIGQA            AGS L   A + +A  V   LG      A
Sbjct: 41  FIALVIGLGAGAGVLIGQAYGAGETGTVKAIAGSTLLLGAIIGLAAAV---LGSVFARQA 97

Query: 450 PEAVAVPADV 459
            + +  PADV
Sbjct: 98  LQGLGTPADV 107