Pairwise Alignments

Query, 316 a.a., IS5 family transposase IS4811 from Azospirillum sp. SherDot2

Subject, 364 a.a., AraC-like DNA-binding protein from Paraburkholderia graminis OAS925

 Score =  125 bits (315), Expect = 1e-33
 Identities = 101/325 (31%), Positives = 154/325 (47%), Gaps = 29/325 (8%)

Query: 3   VDPLAEVVSLLKPAARFSKFVECAGSWRIRREGTGE------------PFYCAILEGKCR 50
           +D L++V+ L+  +       +    W +  E T E              Y  I EG CR
Sbjct: 5   MDALSDVLRLVHLSGAVYLSADFTAPWCVFGEATRELCVSFLPRAERIVSYHLITEGSCR 64

Query: 51  M-MVNGHTPAV-LEAGDFVMVPAMQEFINESPVPPPPG----VFERPAEIGPGQFRAGQF 104
             +V+  + A+ ++AG+ ++VP  +  +  S V   P     +  +  E  PG       
Sbjct: 65  ARLVDDPSSAICVDAGELLVVPQGEAHLMGSSVELEPAPSHQMLSQYLETAPGDV----I 120

Query: 105 RAGCAEGSPDLRMQVGHCVFDSPDAPLLVPLLPRT--VIVRGEPR---LLTVMQLVSDES 159
           R     G    R+  G    D      ++  LPR   + +R + R   L + ++L + E+
Sbjct: 121 RLSYGGGGAKTRLICGFLACDDTLTNPVLSALPRMFKIDMRNDARSAWLESSLKLAALEA 180

Query: 160 QARRSARDLVLERLLEVLLIEAFR-CAGSVDG-APGLARGLADPRLADALGAMHAEPGRS 217
              R    +VL RL E+L +EA R C  S+     G   G++D  +  +L  MHA+P   
Sbjct: 181 AELRVGSAIVLGRLSELLFVEAVRRCVDSLPADRKGWLAGVSDRFVGRSLALMHAQPAHG 240

Query: 218 WTVAELAAEAGMSRSAFFARFDRVVGVAPMEYLLSWRMALAKQLLRDSEFGVEEVAERVG 277
           WTV ELA +AG+SRSA   RF +++G  PM+YL  WR+ +A Q LRD    +  +AERVG
Sbjct: 241 WTVDELARKAGLSRSALAQRFTQLLGQPPMQYLARWRLQIAAQALRDGAQSLTAIAERVG 300

Query: 278 YSSANTFTVAFTRFQGVSPARYSRS 302
           Y S   F  AF R  G+ PA + RS
Sbjct: 301 YESEAAFNRAFKREFGLPPASWRRS 325