Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 374 a.a., ABC-2 family transporter protein from Pseudomonas aeruginosa PA14

 Score = 70.5 bits (171), Expect = 8e-17
 Identities = 85/325 (26%), Positives = 128/325 (39%), Gaps = 20/325 (6%)

Query: 57  PVAVLDFDGSDLSRTIVRTVDATPDAAVARRVADLAEGRRLILSGAVHGLLMIPRDLERD 116
           P+AV+D D S LS  IV      P       +   AE  R +  G     L IP D +RD
Sbjct: 51  PIAVVDEDRSQLSSRIVNAFQ--PPYFRPPEMIGHAEMDRGMDVGLYTFTLDIPPDFQRD 108

Query: 117 VKAARRPEVVFFYNAQTLSTGNLVLRGISNAVPTVAAGIRLSLRTAQGQPMDAAQASLAP 176
           V A R+P +    N     TG     G       VA  +R  +   + +P   AQ     
Sbjct: 109 VLAGRKPSIQV--NVDATQTGQ-AFSGAGYIQNIVATEVREFVSRYRAEPSMPAQ----- 160

Query: 177 IPVQVHGLFNPTMNYAHFLLAALLPSLLQVVVVVASAYSVGLDVETRH-RLAILRRLGGG 235
             ++V   FNP +  A F    ++  + Q+ ++        L  E  H  +  L  +   
Sbjct: 161 --IEVRMEFNPNLTQAWF--GGVMEVINQITMLSIILTGAALIREREHGTVEHLLVMPLS 216

Query: 236 LWPALAGKVLPYTILSVMVLGLA-DSVLFGLLDLPLRGQRGILLLAGILFLLACQLLGIL 294
            +  +  KV    ++ ++  GL+   V+ G LD+P+ G  G+ LL   L L A   +GI 
Sbjct: 217 AFEIMMAKVWSMGLVVLVAAGLSLQWVVRGWLDVPISGSVGLFLLGAGLHLFATTSMGIF 276

Query: 295 LALLLRSTAMAVSIGTLLTAPAFGFMGIGFPRLGMGGFAQGYGALLPGTWYLTARIDQTV 354
           L  + RS      +  L+  P     G   PR  M    Q      P T +++       
Sbjct: 277 LGTVARSMPQLGLLTILVLLPLNILSGGSTPRESMPELVQNIMLAAPTTHFVSLAQAILF 336

Query: 355 RGTPSDLSWPP----VLVLAAFVIG 375
           RG   D+ WP     V + +AF  G
Sbjct: 337 RGAGFDIVWPQFAGIVAIGSAFFFG 361