Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 367 a.a., putative ABC transporter ATP-binding protein or permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 70.5 bits (171), Expect = 8e-17
 Identities = 81/376 (21%), Positives = 161/376 (42%), Gaps = 35/376 (9%)

Query: 11  FLLVFQRELVWLRRRRPGLLVLVTLLPLGLMGLLMAIFSAGLATRLP---VAVLDFDGSD 67
           F+   ++E   + R R  +L+L     LG+  + + +F   ++T +    +AVLD     
Sbjct: 4   FIAFVKKEFYHIFRDRRTMLIL-----LGMPVVQIILFGFAISTEVKNVRLAVLDPSNDV 58

Query: 68  LSRTIVRTVDATPDAAVARRVADLAEGRRLILSGAVHGLLMIPRDLERDVKAARRPEVVF 127
           ++R I+  +DA+    V  R                      P+++E   +  +    + 
Sbjct: 59  VTRKIIDRLDASEYFTVTTRFHS-------------------PQEMETAFRKNKIDMAIV 99

Query: 128 FYN--AQTLSTGNLVLRGISNA----VPTVAAGIRLSLRTAQGQPMDAAQASLAPIPVQV 181
           F    A  L TG+  ++ I +A    + T  +    S+ ++ GQ M      ++ +   V
Sbjct: 100 FGERFADGLYTGDARVQLIVDATDPNMSTSQSNYAASIVSSAGQEMLPPNVFVSRLTPDV 159

Query: 182 HGLFNPTMNYAHFLLAALLPSLLQVVVVVASAYSVGLDVETRHRLAILRRLGGGLWPALA 241
             L+NP M  A+  +  ++  +L ++  + ++ S+  + ET     +L      L+  LA
Sbjct: 160 KLLYNPQMKSAYNFVPGVMGLILMLICAMMTSISIVREKETGTMEVLLVSPVRPLFIVLA 219

Query: 242 GKVLPYTILSVMVLGLADSVLFGLLDLPLRGQRGILLLAGILFLLACQLLGILLALLLRS 301
            K +PY +LS + L     +   +LD+P+ G    L++  +LF+     LG+L++ +  +
Sbjct: 220 -KAVPYFVLSFVNLTTILLLSVFVLDVPVVGSLFWLVMVSLLFIFVSLALGLLISSVTST 278

Query: 302 TAMAV-SIGTLLTAPAFGFMGIGFPRLGMGGFAQGYGALLPGTWYLTARIDQTVRGTPSD 360
              A+ + G +L  P     G+ FP   M    +    ++P  WY+ A     + G P  
Sbjct: 279 QVAAMLASGMILMMPTMVLSGMIFPVESMPVILRAISDIIPARWYIQAVRKLMIEGVPVV 338

Query: 361 LSWPPVLVLAAFVIGL 376
           L    + +L    + L
Sbjct: 339 LVLKEIGILLLMAVVL 354