Pairwise Alignments

Query, 366 a.a., HTH-type transcriptional regulator DegA from Azospirillum sp. SherDot2

Subject, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (387), Expect = 6e-42
 Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 2/310 (0%)

Query: 45  EIARLAGVSPITVSRALRQPEKVAEAKRRKILEIVERTGYATNPHARALRSGQSNIVAAF 104
           ++A   GV+ +TVSR LR P+ VA A R KI   VE  GY  N     L    S  +   
Sbjct: 11  DVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAIGIL 70

Query: 105 VSNLQSQQFCLAVQGCGEVLEPQGYQLMIGQTSYSYAKETTMIQSLREMRPAAVMFTGVI 164
           + +L +Q F   VQG   V +  GY+ ++    Y   +E   I SL   +   ++ T   
Sbjct: 71  LPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILTESH 130

Query: 165 EIEENRRALRALGIPIMETWAYPRDPIDMLVGFSNIDGGRLAAEHFAGRGYRRVAYIGRR 224
             +   + + + G+P++ET   P +PIDM VG  +++    A +     G R +AY G R
Sbjct: 131 HTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAYFGAR 190

Query: 225 -SGRGALRLTGFREGARAAGLDIVAELSVDRVTSMVDGRRALAELLSRNAAVEAVFCAND 283
              R  LR+ G+ +  + AGL I   L+    +S     + L E  +R   ++ VFC ND
Sbjct: 191 LDTRTKLRMQGYDQAMQEAGLPIKHVLTGSH-SSFSLAAQLLDEAFARYPDLDGVFCTND 249

Query: 284 LLATGALLEARRLGMRLPDDIAILGFGHNDVAEELPPGLTTIGIDSRDLGRQAGSMILQR 343
            +A G LL A++ G+R+P+ ++++G+   D+   + P LT++      +G ++  +++  
Sbjct: 250 DIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGEKSAELLIAA 309

Query: 344 MRGDMPPEPI 353
           ++G+   + +
Sbjct: 310 LKGERAEQQV 319