Pairwise Alignments
Query, 1042 a.a., Efflux pump membrane transporter BepE from Azospirillum sp. SherDot2
Subject, 1046 a.a., efflux RND transporter permease subunit from Lysobacter sp. OAE881
Score = 845 bits (2182), Expect = 0.0
Identities = 472/1028 (45%), Positives = 679/1028 (66%), Gaps = 25/1028 (2%)
Query: 1 MVLSDISIRRPVLATVMSLALMLIGIVSYQRLSVREYPKIDEPVVTVETTYKGASAQIIE 60
M LSD+SIRRPV ATVMSL ++++G++++ RL++RE P ID P+V+V+ Y GASA ++E
Sbjct: 1 MNLSDLSIRRPVFATVMSLLIIVLGVMAFSRLTLRELPAIDPPIVSVQVEYPGASAAVVE 60
Query: 61 SQVTQTLEDSLAGIEGIDVMSSISRAEKSQITLRFRLDRNVDVAASDVRDRVGRVRAQLP 120
+++TQ LED+LAGIEGI+ + S S ++ I++ F L+R ++ AA+DVRD V RV ++P
Sbjct: 61 TRITQILEDALAGIEGIETIESRSVNGRASISIEFTLNREIEAAANDVRDAVSRVLDRMP 120
Query: 121 SEIDEPVIAKVEADAQPIIYLAFSSDRHSPLEVTDFADRYVKDRLQNLPGVAQVRIFGER 180
E D P + KVE+DA PI++L SS R L+++D+A+RYV DRL ++ GVAQVRI G++
Sbjct: 121 DEADPPEVEKVESDADPILWLNMSSTRMDTLQLSDYAERYVVDRLSSVDGVAQVRIGGQQ 180
Query: 181 RFAMRLWLDPQRMAAYRVTPQDVENALRRQNVEIPAGRVESVAREFTVVSETDLRSPAEF 240
R+AMR+WLD +AA +T +VENAL +NVE+PAGR+ES AR+FT+ + P +F
Sbjct: 181 RYAMRVWLDRDALAARGITVNEVENALEAENVELPAGRIESNARDFTLRVARSYQKPEDF 240
Query: 241 EAIIL-RDDSGYLVRLRDVGRAELGALDERVSARFNGRGAVAIGVVKQSTANPLDVSKAV 299
I L + GY+VRL DV R EL + + R R NG + +G+VK STAN LDV++AV
Sbjct: 241 AQIPLGKGTDGYVVRLGDVSRIELASAERRAYYRSNGEPNIGLGIVKTSTANSLDVARAV 300
Query: 300 NDALPKIRAAVPDGMGVDVGYDSSVFIAKSIDAVFHTIFEAIILVVLVIFFFLRSLRATL 359
+ K++ +P+G + V +D+++FI +++ V+HT+ EAI+LV++VI+ FL S RA L
Sbjct: 301 REEAEKVQKTLPEGTKIFVAFDTTIFIESAVERVYHTLIEAIVLVLVVIWLFLGSFRAAL 360
Query: 360 VPLVTIPVSLIGGFALMYALGFSINTLTLLSMVLAIGLVVDDAIVMLENIFRYVEEGMNP 419
+P VT+PV LI F +Y GFSIN LTLL++VLAIGLVVDDAIV+LENI R + G
Sbjct: 361 IPAVTVPVCLIAAFIPLYLFGFSINLLTLLALVLAIGLVVDDAIVVLENIQRRTDLGEPR 420
Query: 420 FQAALKGSREIGFAVIAMTITLAAVYAPIGFMTGRTGRLFTEFALTLAGAVIVSGFVALT 479
AA +G++++ FAVIA T L AV+ P+GFM G TGRLF E ++ LAGAV +S FVALT
Sbjct: 421 LVAAKRGTQQVAFAVIATTAVLVAVFLPVGFMEGNTGRLFRELSVALAGAVAISAFVALT 480
Query: 480 LSPMMCSKLLK--HETKHGLLYRAIERFLEGMTNGYRRLL-RLSLRARPLVLLIGLGVAA 536
L+PMM SKL++ ++ K ++R + L+G+T YR LL R + A + L+ +GV
Sbjct: 481 LTPMMSSKLVRPHNQEKSNFIHRWVNARLDGITTRYRGLLSRTTALATSRIWLLVVGVML 540
Query: 537 A----SYFLFTGLKSELSPVEDRGTIVGIAIAPEGSTLDYTMGYAQRMEALFR----QIP 588
A S L + SEL+P EDRG+ + PEG+ DYT+ Q++E + +
Sbjct: 541 ATIVVSGLLLKLVPSELAPAEDRGSFQIMIQGPEGAGFDYTVNQVQQVEKIVAAHTGEGQ 600
Query: 589 VLEKF--FVVVGFPV---VNQGIAFVRLIDWDEREVKQQAITAQLFPKMFGIPGILGFVT 643
++++ V GF ++ G V L DW +R+ + L ++ +PG+
Sbjct: 601 TIQRYNPRVPGGFGASEEMHTGRIAVFLQDWKDRKTSTAEVADSLRAELGKLPGVRAMPQ 660
Query: 644 NPPSLGQSPIDKPVNFVIQTSLPFEELQAMVNAMMAEARNFPGLTNLDTDLKLNKPELRV 703
L +S +P+N V+ + EL + ++A+ PG ++D+D K +P++RV
Sbjct: 661 VSGGLVRSR-GQPINIVL-GGPEYAELAQWRDKLIAKMEANPGFFSVDSDYKETRPQMRV 718
Query: 704 SLDRDKAADLGVDVDTVGRTLETLLGGRQVTRFKKDGKQYDVIVQVANVDRRNPDDIAGI 763
+DR +AADLGV V +G LET++G R+VT F ++G++YDVIVQ R +P+D+A I
Sbjct: 719 EIDRQRAADLGVPVTDIGHALETMMGSRRVTTFVQNGEEYDVIVQSDRELRASPEDLAAI 778
Query: 764 YVRGGTSATGGAGQMISLANLVKVEERVAPKELNHFNKLRSATITATLAPGTSLGEALAV 823
VR S GG +I L+NLV + E P LN FN+LR+ TI+A L PG +GEA+
Sbjct: 779 QVR---SRDGG---LIPLSNLVTLRELAEPGSLNRFNRLRAITISAGLTPGYPMGEAIKW 832
Query: 824 MQAAANKVLPATAQTDYAGQSREFRESATGLYFVFILALAFIYLVLAAQFESFVDPFVIM 883
++ + LP AQ D+ G+SRE+ ++ + F LAL +YLVLAAQFESF+ PFVIM
Sbjct: 833 LEDSVRTELPDHAQIDWKGESREYIQAGGAVLLTFTLALLVVYLVLAAQFESFIHPFVIM 892
Query: 884 LTVPLSMTGALAALQMSGGTMNVYSQIGLVTLVGLITKHGILIVEFANQLQRAGTDIRKA 943
LTVPL + GAL L +GGT+N++SQIG+V LVGL K+GILIVEFANQL+ G IR A
Sbjct: 893 LTVPLGVLGALIGLAATGGTLNLFSQIGIVMLVGLAAKNGILIVEFANQLRDEGRSIRDA 952
Query: 944 VEEAAVLRLRPILMTTGAMVLGAVPLAYAKGAGAESRQAIGAVIVGGMTLGTLLTLFVVP 1003
+ E++ +RLRPILMT+ A V+GAVPL A G G+ SR IG V++ G++ TLL+LFVVP
Sbjct: 953 IVESSSVRLRPILMTSIATVVGAVPLVLAGGPGSASRATIGIVVIFGVSFSTLLSLFVVP 1012
Query: 1004 TVYSYLAR 1011
Y LA+
Sbjct: 1013 AFYVLLAK 1020
Score = 65.5 bits (158), Expect = 2e-14
Identities = 109/481 (22%), Positives = 194/481 (40%), Gaps = 31/481 (6%)
Query: 41 DEPVVTVETTYKGASAQIIESQVTQTLEDSLAGIEGIDVMSSISRAEKSQITLRFRLDRN 100
D V V+ K +A E Q Q + G G S + + L+ DR
Sbjct: 579 DYTVNQVQQVEKIVAAHTGEGQTIQRYNPRVPGGFGA---SEEMHTGRIAVFLQDWKDRK 635
Query: 101 VDVAASDVRDRVGRVRAQLPSEIDEPVIAK--VEADAQPIIYLAFSSDRHSPLEVTDFAD 158
A +V D + +LP P ++ V + QPI + + E+ + D
Sbjct: 636 TSTA--EVADSLRAELGKLPGVRAMPQVSGGLVRSRGQPINIVLGGPEY---AELAQWRD 690
Query: 159 RYVKDRLQNLPGVAQVRI-FGERRFAMRLWLDPQRMAAYRVTPQDVENALRRQNVEIPAG 217
+ + +++ PG V + E R MR+ +D QR A V D+ +AL
Sbjct: 691 KLIA-KMEANPGFFSVDSDYKETRPQMRVEIDRQRAADLGVPVTDIGHALETMMGSRRVT 749
Query: 218 RVESVAREFTVVSETDLR---SPAEFEAIILRDDSGYLVRLRDVGR----AELGALDERV 270
E+ V+ ++D SP + AI +R G L+ L ++ AE G+L+
Sbjct: 750 TFVQNGEEYDVIVQSDRELRASPEDLAAIQVRSRDGGLIPLSNLVTLRELAEPGSLN--- 806
Query: 271 SARFNGRGAVAIGVVKQSTANPLDVSKAVNDALPKIRAAVPDGMGVDVGYDSSVFIAKSI 330
RFN A+ I + +A+ +R +PD +D +S +I
Sbjct: 807 --RFNRLRAITISA---GLTPGYPMGEAIKWLEDSVRTELPDHAQIDWKGESREYIQAG- 860
Query: 331 DAVFHTIFEAIILVVLVIFFFLRSLRATLVPLVTIPVSLIGGFALMYALGFSINTLTLLS 390
AV T A+++V LV+ S V ++T+P+ ++G + A G ++N + +
Sbjct: 861 GAVLLTFTLALLVVYLVLAAQFESFIHPFVIMLTVPLGVLGALIGLAATGGTLNLFSQIG 920
Query: 391 MVLAIGLVVDDAIVMLENIFRYVEEGMNPFQAALKGSREIGFAVIAMTITLAAVYA-PIG 449
+V+ +GL + I+++E + +EG + + A+ S + I MT V A P+
Sbjct: 921 IVMLVGLAAKNGILIVEFANQLRDEGRS-IRDAIVESSSVRLRPILMTSIATVVGAVPLV 979
Query: 450 FMTGRTGRLFTEFALTLAGAVIVSGFVALTLSPMMCSKLLKHETKHGLLYRAIERFLEGM 509
G + + V S ++L + P L K+ + + +E+ LE
Sbjct: 980 LAGGPGSASRATIGIVVIFGVSFSTLLSLFVVPAFYVLLAKYTRSPEAVSQELEK-LEAS 1038
Query: 510 T 510
T
Sbjct: 1039 T 1039