Pairwise Alignments

Query, 784 a.a., Protein YhgF from Azospirillum sp. SherDot2

Subject, 779 a.a., RNA-binding transcriptional accessory protein from Pseudomonas aeruginosa PA14

 Score = 1022 bits (2642), Expect = 0.0
 Identities = 534/791 (67%), Positives = 631/791 (79%), Gaps = 19/791 (2%)

Query: 1   MLSISQRIADELS------VRESQVASAIAMLDEGSTVPFIARYRKEATGGLDDTQLRTL 54
           M SI+ RIA+ELS      V+  QVA+A+A+LDEGSTVPFIARYRKE TG LDDTQLR L
Sbjct: 1   MDSINTRIAEELSALPSGRVQPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRML 60

Query: 55  EERLGYLRELEDRRASILSTIQDQGKLTPELERQIKQADTKTRLEDLYLPYKQKRRTKAQ 114
           EERL YLRELE+RR +IL++I++QGKLTPEL R IK ADTKTRLEDLYLPYKQKRRTK Q
Sbjct: 61  EERLRYLRELEERRGAILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQ 120

Query: 115 IAREAGLEPLADALLADPKKQPDMEAAAFVSADKGVADVKAALDGARHILVERFGEDAEL 174
           IA EAGL  LADAL  DP   P+ EAA FV A+KG ADVKA L+GA++IL+ERF EDA L
Sbjct: 121 IALEAGLGALADALFDDPTLVPESEAARFVDAEKGFADVKAVLEGAKYILMERFAEDATL 180

Query: 175 VGRLRTAMADKGVVTSKVIEEKKAEGAKFSDYFDFSENWSKLPSHRALALFRGRAQGVLD 234
           + +LR  M ++  +T++V+  K+ EGAKFSDYF+  E     PSHRALA+FRGR +GVL 
Sbjct: 181 LDKLRVFMKNEATLTARVVPGKELEGAKFSDYFEHDEPLKSAPSHRALAIFRGRNEGVLS 240

Query: 235 IRLDLPVEE-GQPHPAEGTIAVHTGIRDQGRPADKWLSDVVRWTWKLKIGPHIETDLMGS 293
             L +  E  G  HP+E  IA   G+ +QGR ADKWL++VVRWTWK+K+  H+ETDL G 
Sbjct: 241 ASLKVGEEAPGTLHPSEVMIAERFGLSNQGRAADKWLAEVVRWTWKVKLYTHLETDLFGE 300

Query: 294 LRERAEDEAIRVFARNLHDLLLAAPAGQRVTIGLDPGIRTGVKVAVVDATGKLVETTTIY 353
           LR+ AEDEAI VFARNLHDLLLAAPAG R T+GLDPG+RTGVKVAVVDATGKL++T T+Y
Sbjct: 301 LRDGAEDEAISVFARNLHDLLLAAPAGPRATLGLDPGLRTGVKVAVVDATGKLLDTATVY 360

Query: 354 PHPPRNDWDGSLAVLAALAARHKAELISIGNGTASRETDKLAADLMKRHPELSLTKLVVS 413
           PH P+N WD +LAVLAAL A+H+ ELI+IGNGTASRETDKLA +L+K++P + LTK++VS
Sbjct: 361 PHAPKNQWDQTLAVLAALCAKHQVELIAIGNGTASRETDKLAGELIKKYPGMKLTKIMVS 420

Query: 414 EAGASVYSASETAAHEFPTLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVAG 473
           EAGASVYSASE AA EFP LDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDV+ 
Sbjct: 421 EAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQ 480

Query: 474 GKLARSLDAVVEDCVNAVGVDLNTASIPLLTRVSGLNETIARNIVEHRDRNGAFRSRKQL 533
            KLARSLDAVVEDCVNAVGVD+NTAS  LL R+SGLN T+A+NIV HRD NGAFR+R +L
Sbjct: 481 LKLARSLDAVVEDCVNAVGVDVNTASAALLARISGLNSTLAQNIVAHRDANGAFRTRDEL 540

Query: 534 LDVARLGPKTFEQAAGFLRIRDSENPLDGSAVHPEAYPVVQRIVKTTGRDLGSVIGDARF 593
             V+RLG KTFEQAAGFLR+ + +NPLD SAVHPE YP+VQRI   T RD+ S+IGD+ F
Sbjct: 541 KKVSRLGEKTFEQAAGFLRVMNGDNPLDASAVHPETYPLVQRIAADTERDIRSLIGDSAF 600

Query: 594 LRGLNAEEFTDERFGVPTVEDIIKELEKPGRDPRPEFKTATFKEGVEELKHLQPGMMLEG 653
           L+ L+ ++FTDE FG+PTV DI+KEL+KPGRDPRPEFKTA F+EGVE LK L+PGM+LEG
Sbjct: 601 LKRLDPKKFTDETFGLPTVTDILKELDKPGRDPRPEFKTAEFQEGVESLKDLKPGMVLEG 660

Query: 654 VVTNVTAFGAFVDIGVHQDGLVHISQLANSFVKDPHTVVKAGDVVKVKVLEVDIPRKRIA 713
           VVTNVT FGAFVDIGVHQDGLVHIS L+  FVKDP+ VVKAGD+VKVKV+EVDIPR R+ 
Sbjct: 661 VVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVG 720

Query: 714 LTMRMGEEAPRPARREEQRRDERGPGRPPQQQDRRPAAPAAKAAPKPAKAPEPVNSAFAE 773
           L+MRM +    P  + E +R  R  G    +Q+R   AP  ++AP       P N+A A 
Sbjct: 721 LSMRMSD---TPGEKVEGQRGGRPAGSGQPRQER--GAPRGQSAP-------PANNAMAA 768

Query: 774 AFARAQSGKKK 784
            FA A+  KKK
Sbjct: 769 LFANAKQLKKK 779