Pairwise Alignments

Query, 318 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 323 a.a., branched-chain amino acid ABC transporter permease from Azospirillum brasilense Sp245

 Score =  135 bits (340), Expect = 1e-36
 Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 13/312 (4%)

Query: 1   MNRLLLIAALAVAYVGVPLLFGGNAYVLGLIVAALTIAGVAVAWALLGNLGGMVSFGHAA 60
           + R +L+A LA A + +P     + Y+L L + AL  A +A +  L+    G  S GH A
Sbjct: 3   LERNILLALLAGAAL-LPFAVT-DQYILHLAIMALFYAVLASSLNLVVGYVGEFSLGHTA 60

Query: 61  FFGVGSYTSAVLAMKLGVPVFASMLLGGVGAALSSIAM-LPALRLRGPYFALAILAYAHI 119
           F G G+YT+A+L+ + G+P++ ++ L G+ +A+   A+    LRL+GPYF +  L++A +
Sbjct: 61  FLGTGAYTAALLSTQAGMPMWMTIPLAGLVSAVFGFAIGAITLRLQGPYFVIVTLSFAEV 120

Query: 120 FQILTTEMTPVTGGAGGLLSIPR--FPKILGFDFGEKLGGYLIVLTIVVLAALAYDAIRR 177
            +I+      VT G  GL  + +  F  +   D   K G +LIVL I  +A         
Sbjct: 121 LRIVANNWIAVTNGPMGLAGVGQTLFGNVAVTD---KAGFFLIVLGIAAVALYLSYRFVY 177

Query: 178 STWGLALKAMHDTEVATRVVGVPSTHLKAAMLVLSAFITGVVGAFNAHFISFLDPDYAFS 237
           S  G A  A+ +     + +GV          VL AF+ G+ G F AH+ISF+ P+  F 
Sbjct: 178 SNAGRAAVAVRENRYVAQSIGVDPFGTAMQAFVLGAFLAGLAGGFYAHYISFVGPE-VFR 236

Query: 238 SGWTVLPIAAAIFGGYRTVWGPVVGALAIYLVDQLLFKPILPHGHQMILGVLLCAMILFS 297
             +    I   + GG  T+ GP+ GA+ + ++++ L +  +      + G+++ A++LF 
Sbjct: 237 FAFMATMIIMVLLGGKGTLIGPLAGAVIVTVLEEYLRE--VQELRLTLFGLIVMAIVLFL 294

Query: 298 PGGLMP--ALRR 307
           P GLM   ALRR
Sbjct: 295 PNGLMGFIALRR 306