Pairwise Alignments

Query, 318 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 358 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Acidovorax sp. GW101-3H11

 Score =  132 bits (332), Expect = 1e-35
 Identities = 93/286 (32%), Positives = 143/286 (50%), Gaps = 14/286 (4%)

Query: 26  YVLGLIVAALTIAGVAVAWALLGNLGGMVSFGHAAFFGVGSYTSAVLAMKLGVPVFASML 85
           Y L  +   L  + V +   LL    G+ S GHAAF GVG+YT AVL   +G P   S+ 
Sbjct: 42  YWLAQLTFVLIYSIVGLGLMLLAGFTGLFSLGHAAFLGVGAYTQAVLT-GMGWPFALSLA 100

Query: 86  LG-GVGAALSSIAMLPALRLRGPYFALAILAYAHIFQILTTEMTPVTGGAGGLLSIPRFP 144
              G+ AA+  +  LPALR++G Y  +A L++  I + +      VTGG  G   +P  P
Sbjct: 101 CAAGLSAAVGVVVGLPALRVKGIYLGMATLSFGFIVEEVFARWESVTGGNSGKHLVP--P 158

Query: 145 KILGFDFGEKLGGYLIVLTIVVLAALAYDAIRRSTWGLALKAMHDTEVATRVVGVPSTHL 204
           ++ G+ F      Y + L I V++ LA   + RS  G A  A+ D+E++ + +G+     
Sbjct: 159 QMFGYSFESTESFYFLCLVIAVVSTLAILNLLRSPTGRAFVAIRDSEISAQSMGIHLARY 218

Query: 205 KAAMLVLSAFITGVVGAFNAHFISFLDPDYAFSSGWTVLPIAAAIFGGYRTVWGPVVGAL 264
           K     LSA + GV GA  AH + F+ PD  F+   ++  +   + GG  +V G  +GA+
Sbjct: 219 KTLSFSLSAALAGVGGALYAHKLQFISPD-QFNILQSIDLLLMIVIGGLGSVHGAFLGAI 277

Query: 265 AIYLVDQL--LFKPILPHG-------HQMILGVLLCAMILFSPGGL 301
            +  + Q+  L K  LP           ++ G +L A +LF P GL
Sbjct: 278 FLISMPQMISLSKDWLPAAIGQAPGLQAVVYGAVLIAFVLFEPMGL 323