Pairwise Alignments

Query, 318 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 332 a.a., branched-chain amino acid ABC transporter permease from Castellaniella sp019104865 MT123

 Score =  118 bits (295), Expect = 2e-31
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 28/329 (8%)

Query: 2   NRLLLIAALAVAYVGVPLLFGGNAYVLGLIVAALTIAGVAVAWALLGNLGGMVSFGHAAF 61
           NRL L     VA          +A VL ++  A   A  A    +L    GMVSFGHAAF
Sbjct: 8   NRLTLTTIGCVALTVALGQIISSATVLSILTQAAIFALFATGVGVLLKQNGMVSFGHAAF 67

Query: 62  FGVGSYTSAVLAMKLGVPVFASMLLGGVGAALSSIAM-LPALRLRGPYFALAILAYAHIF 120
           FG+ +Y  A+   +  +P    +L+     A+ +  + L  +R+ G  FA+  LA+  +F
Sbjct: 68  FGLSAYGIAICLQETSLPAELIILISLAATAIFAFVLALVIVRVPGIAFAMLTLAFGQLF 127

Query: 121 QILTTEMTPVTGGAGG--------LLSIPRFPKILGFDFGEKLGGYLIVLTIVVLAALAY 172
             L  +   +TGGA G        L  IP    +L       + G ++VLT+ +LA L  
Sbjct: 128 YQLALKSRSLTGGADGISIAWPDTLFGIPT-STLLDNSVIFTISGVILVLTLALLACL-- 184

Query: 173 DAIRRSTWGLALKAMHDTEVATRVVGVPSTHLKAAMLVLSAFIT---GVVGAFNAHFISF 229
               RS +G   +A+ D       +G+  T  +A +  LSA IT   G++ +FN+ FIS 
Sbjct: 185 ---HRSRFGQTTEAIRDNPERAAFIGIRPTLPRALIFTLSAVITAAAGILASFNSGFIS- 240

Query: 230 LDPDYAFSSGWTV--LPIAAAIFGGYRTVWGPVVGALAIYLVDQLLFKPILPHGHQMILG 287
             PD   S  W+V    +   + GGY  V GP +GA+ IY+V + L   +  H    + G
Sbjct: 241 --PD---SLHWSVSGTVLMMVVVGGYWNVTGPALGAV-IYIVAKDLIGDLSTH-WLSLFG 293

Query: 288 VLLCAMILFSPGGLMPALRRRPVKESRHA 316
            LL  +++F+  GL  ALR    +  R A
Sbjct: 294 ALLIVIVVFAENGLSGALRTLAARTRRSA 322