Pairwise Alignments

Query, 227 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 577 a.a., Tfp pilus assembly protein PilF from Paraburkholderia bryophila 376MFSha3.1

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 59/195 (30%), Positives = 79/195 (40%), Gaps = 1/195 (0%)

Query: 11  AFDRHQSGGFDEAERLYRRILAGEPAEAEALHRYGLLVAQLGRLEEADGLLARALTLDSR 70
           A   HQ+G  D AE +YR ILA  P  ++ALH +G+L  Q G+  +A  L++ AL  D  
Sbjct: 4   ALGAHQAGRLDTAESIYREILALAPTNSQALHYFGVLHYQRGQYADAAALMSNALKYDRH 63

Query: 71  ASEVAVNHAKILRALHRPEDAARRFHHALMLSPALLTALEGLGHAEREAGHTAVAAEAYG 130
            +    N      AL   ++A   +  AL L P    A    G A +  G    A E Y 
Sbjct: 64  DAACWSNRGLAAAALGHLDEATICYDQALQLQPDFADARNNFGTALQAQGALNEAVEQYR 123

Query: 131 RAARLGTGAAVLH-RWGIALDSLGRPEAAAEALRCSARLDFTVPSVAVRLAAILERLGCQ 189
            A          H   G AL  LGR   A    R + R+D                 G +
Sbjct: 124 LAIASNPALVDAHLNLGTALGKLGRFAEALACYRDALRVDPASAEAHFNAGNAYTAQGER 183

Query: 190 GEAAGWYRRALVLQP 204
             A   + RAL L+P
Sbjct: 184 EAAVASFERALALRP 198



 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 43/137 (31%), Positives = 55/137 (40%)

Query: 18  GGFDEAERLYRRILAGEPAEAEALHRYGLLVAQLGRLEEADGLLARALTLDSRASEVAVN 77
           G  +EA   YR  +A  PA  +A    G  + +LGR  EA      AL +D  ++E   N
Sbjct: 113 GALNEAVEQYRLAIASNPALVDAHLNLGTALGKLGRFAEALACYRDALRVDPASAEAHFN 172

Query: 78  HAKILRALHRPEDAARRFHHALMLSPALLTALEGLGHAEREAGHTAVAAEAYGRAARLGT 137
                 A    E A   F  AL L P    A   LG A  + G  A A   Y RA  +  
Sbjct: 173 AGNAYTAQGEREAAVASFERALALRPDYAEAHINLGSAIGKHGDYAGAESHYRRAVAIAP 232

Query: 138 GAAVLHRWGIALDSLGR 154
               L   G +L + GR
Sbjct: 233 NPTNLVCLGGSLGAQGR 249



 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 17/219 (7%)

Query: 2   SDSHSLLAKA--FDRHQS-------------GGFDEAERLYRRILAGEPAEAEALHRYGL 46
           +D+ +L++ A  +DRH +             G  DEA   Y + L  +P  A+A + +G 
Sbjct: 48  ADAAALMSNALKYDRHDAACWSNRGLAAAALGHLDEATICYDQALQLQPDFADARNNFGT 107

Query: 47  LVAQLGRLEEADGLLARALTLDSRASEVAVNHAKILRALHRPEDAARRFHHALMLSPALL 106
            +   G L EA      A+  +    +  +N    L  L R  +A   +  AL + PA  
Sbjct: 108 ALQAQGALNEAVEQYRLAIASNPALVDAHLNLGTALGKLGRFAEALACYRDALRVDPASA 167

Query: 107 TALEGLGHAEREAGHTAVAAEAYGRAARLGTGAAVLH-RWGIALDSLGRPEAAAEALRCS 165
            A    G+A    G    A  ++ RA  L    A  H   G A+   G   A AE+    
Sbjct: 168 EAHFNAGNAYTAQGEREAAVASFERALALRPDYAEAHINLGSAIGKHG-DYAGAESHYRR 226

Query: 166 ARLDFTVPSVAVRLAAILERLGCQGEAAGWYRRALVLQP 204
           A      P+  V L   L   G   E   +YR AL   P
Sbjct: 227 AVAIAPNPTNLVCLGGSLGAQGRLDEEETFYREALARDP 265



 Score = 25.4 bits (54), Expect = 0.002
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 18  GGFDEAERLYRRILAGEPAEAEALHRYGLLVAQLGRLEE 56
           G  DE E  YR  LA +P  A+A      L+ + G  ++
Sbjct: 248 GRLDEEETFYREALARDPHYADAHQNLAWLLLKRGDFKQ 286