Pairwise Alignments

Query, 310 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 330 a.a., polysaccharide deacetylase from Herbaspirillum seropedicae SmR1

 Score = 73.6 bits (179), Expect = 6e-18
 Identities = 81/287 (28%), Positives = 117/287 (40%), Gaps = 68/287 (23%)

Query: 21  LKARNAVTIVVYH----DPDP----EVLREHLRWYAKHY--GFTTLDAVATAIETGRWDK 70
           L  R  + I+ YH     PDP    E+     RW  +    GFT L  +A A++  R ++
Sbjct: 11  LGRRRRLCILTYHRVLAQPDPLLGGEIDLASFRWQMQLLAKGFTVLP-LAEALQRLRQNR 69

Query: 71  LPDYPLVITFDDGHRNNTALA-PLFREFDLRPTIYLCSQIVG----------------TA 113
           LP   + ITFDDG+R+   LA P+ ++  L  T++  +  V                  A
Sbjct: 70  LPPRAVSITFDDGYRSVHTLALPVLQQLGLPATVFATTGFVEHGSMWNDRILHAVRRLPA 129

Query: 114 RPYWWKTAAADGIGVERL------------------------KRVSDPERRRLLAEAGND 149
             + W+   A G+  E L                        K ++  ER+R++      
Sbjct: 130 DAHDWQ---ALGLPQELLPSAPDLRHDPDARTHLATLLDAHVKYLAPAERQRVIETLERH 186

Query: 150 PDKDGDDRQAMTWDE---------IARMTDVADYGAHTRTHPILLQCDDDRCSDEIALCR 200
               G   QA   D+         +A      + G HT +HPIL + DD +   EI   +
Sbjct: 187 AGPVGQADQANQADQDLMLDHDMLLALAQAGVEIGGHTTSHPILSRLDDAQARHEICDNK 246

Query: 201 AELEEALGRSCRHFAFPNG----DFSDREVEEIRRAGYRTARTIDPG 243
           A LE  LGR  R FA+PNG    D+  R V  +R AGY  A T   G
Sbjct: 247 AALEAILGRRLRLFAYPNGKPGLDYDQRHVAMVRGAGYEAAFTTAGG 293