Pairwise Alignments

Query, 294 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 297 a.a., Transcriptional regulator, LysR family from Xanthomonas campestris pv. campestris strain 8004

 Score =  223 bits (567), Expect = 5e-63
 Identities = 118/294 (40%), Positives = 173/294 (58%), Gaps = 1/294 (0%)

Query: 1   MRTTDLSELAAFDAVARHRSFRRAGEERGVTASAISHAVGNLEARVGIRLLNRTTRSVSL 60
           M   +  +L A  A+ R  SF RA  + GV+ SA+SH +  LEA +G+RLL RTTRSV+ 
Sbjct: 1   MARDNFKDLLALIAIVREGSFTRAAAKLGVSQSALSHTIRGLEATLGLRLLTRTTRSVAP 60

Query: 61  TDAGAMLLAQLSPAFSEIGSALDALNQFRDTPFGKVRINAPNSIAPFVFGPVMGTLIAQN 120
           T+AG  L+  ++P F+EI  AL AL++ RDTP G VRI A +  A  +  P +  L+ Q 
Sbjct: 61  TEAGERLIQTVAPRFAEIEEALSALSEMRDTPAGSVRITATDYAAREILWPKLAVLLRQY 120

Query: 121 PKLELEIVATDRLVDIVDEGFDAGIRLGESLRDGMTAVKIKPRLRLTVVGSPAYFETRPV 180
           P +++E+V  + L DIV + +D G+RLG+ +   M A +I P +R+ ++ SPAY E RP+
Sbjct: 121 PDIKVELVVDNGLTDIVADRYDLGVRLGDQVEKDMIAARIAPDMRMALIASPAYLERRPL 180

Query: 181 PKVPADLKDHVCIR-NLYPSGTAYAWEFSRASKIIAFEPAGPLSLDDHELMVEAARSGVA 239
           PK P DL  H+CI   +  +G  YAWE  +  + IA    G L+ +     ++AA  G  
Sbjct: 181 PKTPQDLTAHLCINLRMTTAGGIYAWELEKDGREIAVRVEGQLTFNSIYEALDAALQGFG 240

Query: 240 LAYVWEERARPFIARGELIECLASWCAPEDWLYLYYPTRKHLSAGLRAVIEALR 293
           +A+V E+ ARP I  G L   +  W      L+ +YP+R+H S     V+EALR
Sbjct: 241 IAFVQEDLARPHIKAGRLRWVMKDWSPTWPGLHAFYPSRRHSSPAFNLVLEALR 294