Pairwise Alignments

Query, 731 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1281 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  267 bits (683), Expect = 2e-75
 Identities = 200/573 (34%), Positives = 283/573 (49%), Gaps = 60/573 (10%)

Query: 13   DASPNATMADAAMSDAAMLAAVVETSGAGLVVADATRPDHPIVYCNRAFLDMIGYEAGEV 72
            D +     A A  S+ +M  A+ E S  GLV+      D  +   N A   M+GY   E+
Sbjct: 656  DITERKEQARAMASEVSMRRALFEHSRDGLVLLTE---DGAVAEANPAMAAMLGYTPEEM 712

Query: 73   IGRNGDFLQGPDTDPDTAAAIRAAMAAARPLS-----VEVLNYRKDGSAFWNALTLRPVP 127
               +         D D A       A  R LS      + ++  KDG  F   ++   V 
Sbjct: 713  ERLHV-------WDWDAAIPREQITAMLRALSKGGEFFQTVHRHKDGRTFNVEVSASRVE 765

Query: 128  EAGGVSDGRARWIAGSCADVTQSRRSQEELRAAEDQLTRLA-AETFALAEKLDGAREDAE 186
              G        ++     D+T   R ++EL      L  L  A T  LAE          
Sbjct: 766  WEGQA------YVLCLHRDITFRLRLEQELEQHRHHLEELVHARTMELAE---------- 809

Query: 187  AARIAAENASSAKSRFLAMMSHELRTPMTAVIGMGDLLMGTGLNDQQKAFVKTLRSSAGT 246
             AR  AE+AS AKS FLA MSHE+RTPM A++G+  LL     + + +  V  +  +A  
Sbjct: 810  -ARDEAESASRAKSAFLANMSHEIRTPMNAILGLSHLLGREVGDARARERVDKIHGAATH 868

Query: 247  LMTILNDVLDFSKIEAGQLTLEEIDFSLPRLVDDVVQLFLVRAAAKGLSLSASIADDTPR 306
            L+ I+ND+LD SKIEA +L L+  DF L RL D+   L   +  AKGL L   +    P 
Sbjct: 869  LLNIINDILDLSKIEAEKLHLDMQDFLLARLFDNAENLLRPQLEAKGLRLERHLDPALPP 928

Query: 307  HIRGDPTRLRQVLFNLVSNAIKFTDRGTIEIAVWSPDPPADPPADPPAGAAPADAPVTLR 366
             +RGD   L+Q+L N +SNA+KF+D+G I +                   + + + V LR
Sbjct: 929  VLRGDAMHLQQILVNFLSNAVKFSDQGHITLGARL--------------LSRSQSQVELR 974

Query: 367  FEVEDNGIGMTPEQRARLFDAFVQADVSTSRKYGGTGLGLAICKRLVEAMGGEITVASTP 426
             EV D GIG+ PEQ+A LF AF QAD ST+RKYGGTGLGLAI KRL+  MGG+I V S P
Sbjct: 975  LEVADQGIGIAPEQQAALFQAFEQADNSTTRKYGGTGLGLAISKRLIRLMGGDIGVDSKP 1034

Query: 427  GRGSTFRFSILSRLAEAPPVGELGARPALPGAAETPEPTQV-----PLRLLLAEDNDINR 481
            G+GS F  S+   +A+        A       AE   P ++       R+LLAEDN +N+
Sbjct: 1035 GQGSVFWISLRLEVADT-------AAGTTAATAEQELPARLRARHGGCRILLAEDNALNQ 1087

Query: 482  MLVVAMMSRIGHRIDAVTDGRAALDALVAADYDALILDMEMPVLDGRSTARAIRRMDGPV 541
             +   ++   G  +    DG  A+    +  +D +++D+ MP LDG    RAIR + G  
Sbjct: 1088 EVAQDLLHDAGLAVSVAEDGHQAVSLAQSGGFDLVLMDVNMPHLDGLQATRAIRELPG-C 1146

Query: 542  ARIPIVGLSADALPEHRDGHLAAGLDAYLTKPI 574
            A +PI+ ++A A  E R   L AG++ ++ KP+
Sbjct: 1147 ADLPILAMTAGAFAEDRARCLEAGMNDFVAKPV 1179