Pairwise Alignments

Query, 312 a.a., Chemotaxis protein PomA from Azospirillum sp. SherDot2

Subject, 288 a.a., flagellar motor protein MotA from Azospirillum brasilense Sp245

 Score =  430 bits (1105), Expect = e-125
 Identities = 226/269 (84%), Positives = 247/269 (91%), Gaps = 1/269 (0%)

Query: 41  GRSVRLRGGLDVATLVGLAAAAGVILIAITTGGSARAFLDPPSLLIVLGGTLAVTTASFS 100
           GRS R RGG+D+ATLVGLAAAA VI +A+ +GGS RAF+DPPSL+IVLGGTLAVTTASFS
Sbjct: 15  GRSARPRGGVDMATLVGLAAAAVVIFVAMASGGSLRAFVDPPSLIIVLGGTLAVTTASFS 74

Query: 101 LGDVAVAWKNAAAVLVHQTLDPKGVARQVLLLAEAARRAGPETLRNVLPELRAEPFLHRS 160
           L DVA+AW++A AVL+H+T DP+GVARQVLLLAEAARRA PETLRNVLPEL+ E FLHRS
Sbjct: 75  LSDVAIAWRDAGAVLIHRTSDPRGVARQVLLLAEAARRA-PETLRNVLPELKHESFLHRS 133

Query: 161 VTLITEGLPPDAIERMLTGEVEATVGGHGKSAGVLRRASEVAPAMGLIGTLVGLVQMLGS 220
           VTL+ EGLPPD IERML GEVEA+  G  KSAGVLRRASEVAPAMGLIGTLVGLVQMLGS
Sbjct: 134 VTLVAEGLPPDDIERMLIGEVEASGAGKVKSAGVLRRASEVAPAMGLIGTLVGLVQMLGS 193

Query: 221 LSDPSAIGPAMALALLTTFYGAVLGNVVLSPLAAKVERAAEEDALVKTLYTIGAVSIARQ 280
           L+DPS+IGPAMALALLTTFYGAVLGNV L+PLAAKVER AEEDALVKTLYTIGAVSIARQ
Sbjct: 194 LNDPSSIGPAMALALLTTFYGAVLGNVALAPLAAKVERTAEEDALVKTLYTIGAVSIARQ 253

Query: 281 ENPRRLEMLLNAVLPPGKRIQYFDREAPR 309
           ENPRRLEMLLNAVLPPGKRIQYFDR++ R
Sbjct: 254 ENPRRLEMLLNAVLPPGKRIQYFDRDSDR 282