Pairwise Alignments

Query, 312 a.a., Chemotaxis protein PomA from Azospirillum sp. SherDot2

Subject, 237 a.a., Flagellar motor rotation protein MotA from Xanthomonas campestris pv. campestris strain 8004

 Score = 93.6 bits (231), Expect = 4e-24
 Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 60  AAAGVILIAITTGGSARAFLDPPSLLIVLGGTLAVTTASFSLGDVAVAWKNAAAVLVHQT 119
           A   ++  ++  G    +   P + LIV+ GT+A      S      A+K    V+    
Sbjct: 3   AIVAIVGGSVLKGAGISSLWSPAAFLIVIVGTVAAILLHTSPAVFRRAFKIVRWVIQPPA 62

Query: 120 LDPKGVARQVLLLAEAARRAGPETLRNVLPELRAEPFLHRSVTLITEGLPPDAIERMLTG 179
            D   +  +++  +  ARR G   L + LP  + + FL + + ++ +G+ P+++  ML  
Sbjct: 63  SDRPQLLARIVEWSNIARRQGLLGLEDQLPR-QDDAFLRKGLQMLVDGVEPESMRHMLEI 121

Query: 180 EVEATVGGHGKSAGVLRRASEVAPAMGLIGTLVGLVQMLGSLSDPSAIGPAMALALLTTF 239
           EV+        +A V       AP +G+IG ++GL+ ++ +L+DP+ +G  +A A   T 
Sbjct: 122 EVDNQERQDLAAAKVFEGMGIYAPTLGIIGAVLGLMAVMKNLADPAMLGHGIAAAFTATI 181

Query: 240 YGAVLGNVVLSPLAAKVERAAEEDALVKTLYTIGAVSIARQENPRRLEMLLNAVL 294
           YG    N++  P+AAK++         + +   G ++IA+ ENPR +E  L   L
Sbjct: 182 YGIASANLLFLPVAAKLKSVIHCSTNEREMAIEGLIAIAQGENPRNIESKLAGYL 236