Pairwise Alignments

Query, 312 a.a., Chemotaxis protein PomA from Azospirillum sp. SherDot2

Subject, 250 a.a., chemotaxis protein PomA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  162 bits (410), Expect = 8e-45
 Identities = 93/250 (37%), Positives = 138/250 (55%), Gaps = 3/250 (1%)

Query: 50  LDVATLVGLAAAAGVILIAITTGGSARAFLDPPSLLIVLGGTLAVTTASFSLGDVAVAWK 109
           +D+ATL+G+     +I+IAI  GGS   F+D PS++IV+GGT+      F L  V  +  
Sbjct: 1   MDIATLIGIVGGFALIIIAILLGGSLMPFVDIPSVVIVIGGTITAILVMFPLEVVLGSMG 60

Query: 110 NAAAVLVHQTLDPKGVARQVLLLAEAARRAGPETLRNVLPELRAEPFLHRSVTLITEGLP 169
            A         +P      +  LA+ ARR     L  V  +   + FL + + ++ +G  
Sbjct: 61  IAMRTFKFNKENPVQTVEDICKLADTARRESLVALEKVPLQ---DEFLKKGIRMVADGSS 117

Query: 170 PDAIERMLTGEVEATVGGHGKSAGVLRRASEVAPAMGLIGTLVGLVQMLGSLSDPSAIGP 229
            D +  +L  E+      H +   V +     APA G+IGTLVGLV ML +LSDP++IGP
Sbjct: 118 QDQVTALLDAEINFMKQRHRRGQAVFKGLGSAAPAFGMIGTLVGLVNMLQNLSDPASIGP 177

Query: 230 AMALALLTTFYGAVLGNVVLSPLAAKVERAAEEDALVKTLYTIGAVSIARQENPRRLEML 289
           AMA+ALLTTFYGAVL N++  P+A K+E  + ++  +  L   G +SI   E+P+ ++  
Sbjct: 178 AMAVALLTTFYGAVLSNLMFLPMAKKLEERSFDEQFMMQLKMEGVLSILNGEHPQLVKEK 237

Query: 290 LNAVLPPGKR 299
           L A LPP  R
Sbjct: 238 LMAFLPPNLR 247