Pairwise Alignments

Query, 219 a.a., Virulence transcriptional regulatory protein PhoP from Azospirillum sp. SherDot2

Subject, 231 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  220 bits (561), Expect = 1e-62
 Identities = 115/219 (52%), Positives = 152/219 (69%), Gaps = 4/219 (1%)

Query: 1   MRVLVVEDTAELARQLKQRLEGEGYAVDTAADGEEGRFLGETEPYDAAILDLGLPKIDGL 60
           MR+L+VED   L   LKQ L    Y++D A+DGEEG F      YDAAI+D+GLPK+DG+
Sbjct: 1   MRLLLVEDDVALQTNLKQHLLDAHYSIDVASDGEEGLFQAVEYNYDAAIIDVGLPKLDGI 60

Query: 61  TVLRSWRRAGVAVPVLILTARDAWNEKVQGIDAGADDYLAKPFSMEELLARIRALIRRAK 120
           +++R  R+   A P+LILTARD+W +KV+G+DAGADDYL KPF  EEL+AR++ALIRR+ 
Sbjct: 61  SLIRRIRQKERAFPILILTARDSWQDKVEGLDAGADDYLTKPFHPEELVARLKALIRRSA 120

Query: 121 GHASAEIACGPVVLDTRTGRVTVDGQPVELTAFEYRVLSYLMHRKGQTVSRTELTEHVYA 180
           G AS  I  GP  L+T +  V  +G+ V L+  EY++    M  +G+  S+T LTEH+Y 
Sbjct: 121 GKASPIITNGPFSLNTSSLEVRKEGELVTLSGSEYKLFEIFMLHQGEVKSKTALTEHIYD 180

Query: 181 QDFDRDSNTIEVFVGRLRRKLGVD----VIRTVRGLGYR 215
           QDFD DSN IEVF+ RLR+KL  D    +I T+RG GYR
Sbjct: 181 QDFDLDSNVIEVFIRRLRKKLDPDNQYNLIETLRGQGYR 219