Pairwise Alignments

Query, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (358), Expect = 4e-38
 Identities = 144/550 (26%), Positives = 242/550 (44%), Gaps = 49/550 (8%)

Query: 59  LLVGLLVLLPVLRLLWEA-GDATVLGRALNSPMTWRATTNSIAIAAGATLAAALIGGPFA 117
           L++  L++LP+L + + A G++  +   L + +      N++ +     L A L G P A
Sbjct: 13  LVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPSA 72

Query: 118 LLIGLTNLRARTAMSFALILPLMIPPQIVAMAWTHLAGSGSPILKPL----GLAPPVGTA 173
            LI +  L     + +AL+LPL +P  I+   +TH      PI   L    G        
Sbjct: 73  WLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYWF 132

Query: 174 NPVQSSAGMMLVMGIEHAPLVFLALRAALRAIPGDVLEAARASGAGPWRAVRGVVLPLCL 233
             ++S  G  +V+ +   P V+L  RAA       +L++AR     PW++ R + LPL  
Sbjct: 133 PDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLAR 192

Query: 234 PGLVAGLAMAFVAALGNFGVPALLGVPAGIPMLPTLIYRRLAGFGPSALPEVAVLAALIG 293
           P +  GL++  +  +G+FG  +L  V      L T +Y    G+  S L   A ++A++ 
Sbjct: 193 PAIAVGLSLVAMETIGDFGTVSLFAVNT----LTTAVYDTWLGY--SNLNAAAKISAIML 246

Query: 294 LVACLGIALQTILQAR---IASRLPGGARPLADLPLGAARAPVEWLAWGVLALLVAAPLT 350
           ++  L ++ +   + R     ++          L      A + W  WG++A+    PL 
Sbjct: 247 VMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIW-CWGLVAVAFILPLL 305

Query: 351 ALLATSLVSVYGLPIGLDTLTLAHYREVLALDQVGRAFANSLLLSGSAAALLALLAVPLA 410
            L++ +                  Y       Q      NS  +S SAA +  L+A+   
Sbjct: 306 QLISYAWT----------------YFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVAN 349

Query: 411 HAMALSGGGGRIARAVGVLVELPHAVPGVVLGIGCI--LLFLKPL------------PGL 456
               L     R + A+  L  + +AVPG VL IG +  +L L  L            PGL
Sbjct: 350 FYARLQ--NNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGL 407

Query: 457 GVSLYGTLWIILAAYLVRFLPLALRPVQAACAALDPTVEEAARALGAGPLRRLVTVVAPL 516
             S  G+L+ I+ A +VRF  +A+  ++++ + + P+++ AAR +G    + L  V  PL
Sbjct: 408 VFS--GSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPL 465

Query: 517 VAPAAAAGGLLVFLTAFNELTVSILLWSQGRETLGVVVYALEEGGSPTLGAALGVIAILV 576
           +   A   GLLVF+ +  EL  +ILL     ETL   VY         L A   ++ +LV
Sbjct: 466 IRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLV 525

Query: 577 VLAAMLAAGR 586
            L  ++   R
Sbjct: 526 GLIPLVMVNR 535