Pairwise Alignments

Query, 342 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 345 a.a., Novel Xylose regulator from LacI family (from data) from Sinorhizobium meliloti 1021

 Score =  145 bits (365), Expect = 2e-39
 Identities = 99/300 (33%), Positives = 144/300 (48%), Gaps = 4/300 (1%)

Query: 3   RPTISDLAKAAGVSVATIDRLLNGRHPVREETARRIFEAATEIGFHGANAIRQRALAQQP 62
           RPT+ D+A  AGVS+AT+DR+LN R  VR  T  ++  A   +G+     +    LA+  
Sbjct: 2   RPTVHDIAAEAGVSLATVDRVLNNRPGVRSVTRGKVERAIATLGY--VRDVAAANLAKSR 59

Query: 63  DYHLGFILQKERHAFYQEFAARIEEVVGSHPDRRLRATIRFVQS-TSPAELAELIRGMKG 121
            Y L FIL    ++F +   A +   +      RL  TI  V    +PA  A L    + 
Sbjct: 60  SYPLIFILPAGENSFMRGLEAEVRSAMSRSATERLDITILSVPVFDAPALAAALHDARER 119

Query: 122 KVRAVAVTGIDHHDATAAVAELKAAGIPTFSLLSDFAQGVREGYIGTNNLKAGRTAAWLM 181
           +   VAV  +D  + T AV  L+  GI   +L+SD     R+ + G +N+ AGRTA  LM
Sbjct: 120 RPAGVAVVAVDAPEVTEAVKRLREDGIAVVTLVSDLPGSGRDHFAGVDNVAAGRTAGSLM 179

Query: 182 SK-IARGPGRIAVFIGAFRYHGHALRETGFRSYFREFAPEFTLMDSIVNVETRQLTYEAT 240
            + +  G G +AV  G+     H  R  GF++   E      ++  I   +   L     
Sbjct: 180 GRFLGGGEGPVAVLAGSMLVRDHRDRLEGFQAVMSEDFAWRRILPVIEGQDNPSLVETLV 239

Query: 241 LGLLDRHDDVVGIYVAGGGMEGAIAALRELRRPDEVTCIVHELTPESRQGLLDRHVSVVM 300
             LL +H D+ GIY  G G  G +AAL +  +   V  I HELTP SR GLL   +  ++
Sbjct: 240 GALLGQHPDLAGIYSLGAGNRGLVAALEKAGKGRAVCTIAHELTPHSRAGLLSGTIDALL 299