Pairwise Alignments

Query, 380 a.a., Colistin resistance protein EmrA from Azospirillum sp. SherDot2

Subject, 354 a.a., efflux transporter periplasmic adaptor subunit from Pseudomonas aeruginosa PA14

 Score =  234 bits (598), Expect = 2e-66
 Identities = 138/339 (40%), Positives = 206/339 (60%), Gaps = 9/339 (2%)

Query: 43  RRHPIAILALLVVIALLAVAGYIYWQRNIHPYESTDDAFIDTRQFPVAAKVGGYVTEVAV 102
           R+  + + ALLV+I L+ +  ++   R +   +STDDA++      VA KV G+V +V V
Sbjct: 7   RKGSLLLAALLVLILLVYLLFHLLAPRVV---QSTDDAYVHADFTLVAPKVAGFVQDVLV 63

Query: 103 GDNRHVNAGDLLFRIDTRDYQTALDQAQAQIDSAQAAITGYDAQIDAQRAQIEQARAEVS 162
            DN+ V AG LL R+D RD++TAL  A+A +  A+A +   +A +  Q+A IEQARA+V 
Sbjct: 64  EDNQPVKAGQLLARLDDRDFRTALAAAEADVLGAEANLANAEANLQRQQALIEQARAKVR 123

Query: 163 QAEAAVGFAKEDAARYRDLQSRGAGTVQQAQQSTATLQEQQGKLTSANAAVIAAERQVGA 222
             +A + FA+ + +RY+ L S+GAG++Q AQQ+ + +     +L    AAV A  +QV  
Sbjct: 124 AEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIDTASARLAEGQAAVDATRKQVSV 183

Query: 223 LQAQRTSAVADLARAKAQLAQAQLNLSYTAVAAAQPGRVVQLSGAVGQFAQAGQSLAIFV 282
           L+A+   A  DL R +A+  QA+L+LSY  + A   G V +    VG +   G +L   V
Sbjct: 184 LEARVGQARGDLQRMQARRDQARLDLSYCELRAPFDGLVGRRQLRVGAYVTPGSALLAVV 243

Query: 283 P-DDIWVTANFKETQITDMRPGQPVDIHIDAYPGRKVTGHVDSVQPGSGTAFSLLPAENA 341
           P    +V  NF+ETQ+T + PGQ V+I +D +PG  + GHVDS+ P +G +F+ +  +NA
Sbjct: 244 PLQQAYVVGNFQETQLTHVSPGQAVEIRVDTFPGEVLRGHVDSIAPATGLSFAPIAPDNA 303

Query: 342 TGNYVKVVQRIPVKIVVDQWPDGVSIGP---GMSVVPRV 377
           TGN+ KVVQRIPVKIV++  P     G    GMSV  R+
Sbjct: 304 TGNFTKVVQRIPVKIVLE--PRQAMAGKLRVGMSVEARI 340