Pairwise Alignments

Query, 302 a.a., putative D,D-dipeptide transport system permease protein DdpC from Azospirillum sp. SherDot2

Subject, 301 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  231 bits (589), Expect = 2e-65
 Identities = 121/292 (41%), Positives = 178/292 (60%), Gaps = 6/292 (2%)

Query: 12  PLPSSAKAGNSR-----SPAALLLRQLFRRRLVVLSFLVMAAILAVALLAPWITPFNPAK 66
           PL      G  R     S  A  + ++ R  L  +   ++  +L VA+ AP I P+NP  
Sbjct: 8   PLSDGTGEGRQRLRRAASRTAGFIGKMARNPLTAIGGGIIFLLLVVAIFAPLIAPYNPLV 67

Query: 67  MDILGRLKPPTAAHWFGTDEYGRDVLSRVMLGARLSLLVGLLVVVVATVLGTLLGLAAGY 126
            D+   L  P A HWFGTDE+GRD+ SR++ G+R++L + LLV V    LG LLG++AGY
Sbjct: 68  QDLNSALVAPNAQHWFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLLLGVSAGY 127

Query: 127 IR-PLDGLLMRLTDALMAFPDILLAIAFMAALGPSLYNVVLALGIVYTPRVARVVRAACL 185
               +D +LMR+TD  ++FP ++LA+AF+AALGP L +VV+A+ +   P +AR+ RA  L
Sbjct: 128 FGGKVDMVLMRVTDIFISFPSLVLALAFVAALGPGLEHVVIAITLTAWPPIARLARAETL 187

Query: 186 VVREMPFIEAATALGASTPRIVFLHILPNLMSPILVQATFIFAYAILTEAALSFLGVGVP 245
            +R+  FI A    GAS+ R+++ HI+P  +  ++++ T   A  ILT A L FLG+G  
Sbjct: 188 SLRQADFISAVRLQGASSARVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLGFLGLGAQ 247

Query: 246 PTTPTWGNMIASAQQYFQQADWLILFPGCAIVLTVLSLQIVGDGLRDALDPR 297
           P  P WG MI+S + Y  +  W++  PG AI++  L+   +GDGLRD LDPR
Sbjct: 248 PPEPEWGAMISSGRTYMMECWWVVTIPGLAILINSLAFNFLGDGLRDILDPR 299