Pairwise Alignments

Query, 407 a.a., Inner membrane protein YdcO from Azospirillum sp. SherDot2

Subject, 396 a.a., Benzoate transport protein from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (608), Expect = 2e-67
 Identities = 146/381 (38%), Positives = 209/381 (54%), Gaps = 3/381 (0%)

Query: 24  SPSALATGGLVALVGYASSVAVVIQGLAAVGADTAQITSGLVAVGFSMGLSAIWLAWTQR 83
           SPSA+  G +  + GY SS+ ++ Q   A G  + QI+S + A+   M + +I L+   R
Sbjct: 16  SPSAIVAGFIAMMTGYTSSLVLMFQAGQAAGLTSGQISSWIWAISIGMAVCSIGLSLRYR 75

Query: 84  KPISVAWTTPGMALLAAT-GPVAGGFPAAVGAFLTVGALIMVAGLWRPLGRWIAAIPKPL 142
            PI++AW+TPG ALL  + G V+ G   A+GA++T   L+ + GL     R +  IP  L
Sbjct: 76  TPITIAWSTPGAALLITSLGGVSYG--EAIGAYITCAVLVTICGLTGSFERLVKRIPASL 133

Query: 143 ANGMLAGLLLKLCLAPFMAIGQAPGLGLLVLATWAIVGRFARLYAVPAAVAVALAAMAMN 202
           A  +LAG+L K+    F+A     GL L +  T+ IV R +  YAV AA+ +  A   + 
Sbjct: 134 AAALLAGILFKIGSEIFVATQHRTGLVLGMFFTYLIVKRLSPRYAVLAALLIGTALSGLL 193

Query: 203 PPVSGALPADPWPTLSLVAPAFTWEALVGLALPLFVVTMASQNIPGLAVLATFGYTPRVP 262
             +  +  A    T     P F+  A + + +PLFVV M SQN+PG+AVL   GY     
Sbjct: 194 GLLDFSGFALEVATPVWTTPHFSLAATISIGIPLFVVAMTSQNMPGIAVLRADGYNVPAS 253

Query: 263 PAFLATGFASALTAPLGAPTVNLAAITAAMCAGPDADPRPERRWQAAVTGGVGYIALTAL 322
           P   +TG AS L AP G+  +NLAAI+AA+C GP A     +R+ AAV  GV Y      
Sbjct: 254 PLITSTGIASLLLAPFGSHGINLAAISAAICTGPHAHEDRNKRYTAAVWCGVFYGIAGVF 313

Query: 323 AAVTATLVTRSPPILIEAVAGLALIGAFGGSLLAAVQAEEERIPALVTLLVTASGLSFFG 382
            A  A L    P  L+ ++A LAL G+    L  A+   +ER  AL+T +VTASGL+ F 
Sbjct: 314 GATLAALFAALPKELVLSIAALALFGSIINGLSIAMSEVKEREAALITFMVTASGLTLFS 373

Query: 383 VGSAFWGLLFGGAMHVLHRWR 403
           +GSAFWG++ G    ++  WR
Sbjct: 374 IGSAFWGIVAGVLTLLILNWR 394