Pairwise Alignments

Query, 407 a.a., Inner membrane protein YdcO from Azospirillum sp. SherDot2

Subject, 416 a.a., benzoate transporter from Pseudomonas fluorescens FW300-N2E3

 Score =  213 bits (541), Expect = 1e-59
 Identities = 130/388 (33%), Positives = 196/388 (50%), Gaps = 16/388 (4%)

Query: 24  SPSALATGGLV---------ALVGYASSVAVVIQGLAAVGADTAQITSGLVAVGFSMGLS 74
           SP+AL  G L+          +V Y  +  +V Q     G       S + +V   +G++
Sbjct: 6   SPTALRLGDLIHPIVAGLISVIVNYGGTFILVFQAAKVAGLSPELTASWVWSVSIGVGIT 65

Query: 75  AIWLAWTQRKPISVAWTTPGMALLA---ATGPVAGGFPAAVGAFLTVGALIMVAGLWRPL 131
            ++L+W  R+PI  AW+TP  A L    +T P    +  AVGA++   A  ++ GL    
Sbjct: 66  GLFLSWVSREPIITAWSTPAAAFLVVALSTTP----YVEAVGAYIISAAAFVLLGLSGCF 121

Query: 132 GRWIAAIPKPLANGMLAGLLLKLCLAPFMAIGQAPGLGLLVLATWAIVGRFARLYAVPAA 191
            + I  IP  +A G+LAG+LL+  +  F  +   P L  L+ A + +  RF   YAV   
Sbjct: 122 EKVIRLIPPGVAAGLLAGILLQFGIGAFGGMSIDPVLVGLLTAAYVVFKRFTARYAVVGI 181

Query: 192 VAVALAAMAMNPPVSGALPADPWPTLSLVAPAFTWEALVGLALPLFVVTMASQNIPGLAV 251
           + + LA +     V  +  A  +       P F+  AL+ +ALPLF++T+  Q +PG+ V
Sbjct: 182 LVLGLAFLLTQGRVDLSGLALQFAAPVFTRPEFSINALLSVALPLFLITLTGQYMPGMLV 241

Query: 252 LATFGYTPRVPPAFLATGFASALTAPLGAPTVNLAAITAAMCAGPDADPRPERRWQAAVT 311
           L   G++    P    TG  S L AP G+   N+AAITAA+C G +A   P +RW A V 
Sbjct: 242 LRNDGFSTSANPILTVTGLGSLLMAPFGSHAFNVAAITAAICTGKEASEDPSKRWIAGVA 301

Query: 312 GGVGYIALTALAAVTATLVTRSPPILIEAVAGLALIGAFGGSLLAAVQAEEERIPALVTL 371
            GV YI +       A +    P   I  +AGLAL+G  G SL +A+   + R  +L+T 
Sbjct: 302 AGVFYILVGIFGVTLAAVFMALPATFITTLAGLALLGTIGASLASAMADVKSREASLITF 361

Query: 372 LVTASGLSFFGVGSAFWGLLFGGAMHVL 399
           L +A+ ++  G+G AFWGLL G A + L
Sbjct: 362 LASAANITLLGIGGAFWGLLIGLAAYAL 389