Pairwise Alignments

Query, 295 a.a., HTH-type transcriptional activator CmpR from Azospirillum sp. SherDot2

Subject, 294 a.a., Transcriptional regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  141 bits (356), Expect = 2e-38
 Identities = 98/277 (35%), Positives = 142/277 (51%), Gaps = 6/277 (2%)

Query: 1   MRGLNLDQLITFATVVEHGGFTEAAGRLGLTQPAVSMQIRNLEERFGVRLVERVGKRALP 60
           MR ++LD+L T   + + G F EAA  L L  P VS+ I +LE R G +L+ R   R  P
Sbjct: 1   MREISLDRLRTLVAIADLGSFAEAARALHLAPPTVSLHIADLEARVGGKLLSRTRGRVQP 60

Query: 61  TAAGRDLLPFIRRLREEMEAASAAMGRHRAGQVGRVRIGTGATACIYRLPPILTALRSAH 120
           +A G  L+   RRL  + E A   + R   G  GRVR+G    A    LP  L +L   H
Sbjct: 61  SAIGNTLVERARRLLADAEQALEDIERQVQGLAGRVRLGASTGAIAQLLPHALESLSQRH 120

Query: 121 PGLEIIVVTGNTPDILDAVEGGTLDLALVTLPAGR-PGLSIEPVCAEELVCVGP-RGEAP 178
           P +++ V    + + L  +  G+L++ LV LP     GL IEP   + ++   P R E+P
Sbjct: 121 PAIDVQVAVLTSQETLQKLAEGSLEVGLVALPQSPVKGLRIEPWRRDPVMAFLPARWESP 180

Query: 179 PPDRTVAPAALADETLILYERGGTMRAVIDGWFMAGGIQPRPSMELGNVEAIKNLVAAGL 238
                V P  L+ + LIL +    +  +   WF + G QP P ++L   +AIK+LVAAG 
Sbjct: 181 ---EVVTPTWLSAQPLILNDATTRLSRLTAEWFASDGQQPAPRIQLNYNDAIKSLVAAGY 237

Query: 239 GRSILPSVTVAGPQDCDRFAVQTLTPPLIRTLGLVLR 275
           G ++LP    A P   +R  ++ L P L R LG+  R
Sbjct: 238 GATLLPH-EAATPLLDNRIVMRPLKPLLWRQLGIAHR 273