Pairwise Alignments

Query, 587 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 406 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  175 bits (444), Expect = 3e-48
 Identities = 104/258 (40%), Positives = 147/258 (56%), Gaps = 11/258 (4%)

Query: 33  LAVFFLYPVLRLLGLSVQDADTGAWTGEHYARIVDTGVYFRVLMGTFRIAGLTALFSLLL 92
           L  FFL   + L     +DA TGA  G       D  +Y  VL  TF I+    +  LLL
Sbjct: 155 LTAFFLMQAVDL----ERDA-TGALRGAP----TDEAIYIDVLGRTFGISLTVTVLCLLL 205

Query: 93  GYPLAYWLAQLPERKRGVMILAVMVPFWTSYLVKTFAWMVILGRTGVIGGLLA-AGGLPQ 151
           G+P+AY LA LP R+  ++++ V++PFWTS LV+T AW+V+L   G++  LL   G + +
Sbjct: 206 GFPVAYLLANLPPRQANLLMILVLLPFWTSLLVRTAAWVVLLQDQGLVNNLLIWLGVIEK 265

Query: 152 P-EMLHNEFGVMIGMVHAMLPLAVLTMLPVMTGIDRRLVQAAETLGAAPGHAFWLVYFQL 210
           P  +++N  GV++ M H +LP  +L +  VM GI    ++AA +LGA P  AF  VY   
Sbjct: 266 PLRLMYNRVGVIVAMTHVLLPFMILPLYSVMKGISPVYLRAARSLGATPTIAFLRVYLPQ 325

Query: 211 SLPGIAAAGLLTFISSLGFFIVPALLGGPQQTMLAQLIIAQIQEMLNWAFAGALATFMLA 270
            LPG  A  LLTFI +LG++I PAL+GG    ML+  I     + +NW  A AL   +LA
Sbjct: 326 CLPGFGAGALLTFILALGYYITPALVGGAADQMLSYFIAFYTSDTVNWGMASALGAVLLA 385

Query: 271 AALVTCWVYDRIFGLSTL 288
           A LV   VY R+ G  ++
Sbjct: 386 ATLVLYAVYTRLVGTDSV 403



 Score = 46.2 bits (108), Expect = 3e-09
 Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 393 RSFGVAFATAILATLIAGLAALALARSTSRWRGAIFALFLAPMIVPRIVIAVGLFYLFAQ 452
           R+FG++    +L  L+    A  LA    R    +  L L P     +V       L   
Sbjct: 190 RTFGISLTVTVLCLLLGFPVAYLLANLPPRQANLLMILVLLPFWTSLLVRTAAWVVLLQD 249

Query: 453 IGLVATDL-----------------GLVIGHTVLALPFAFVAIAAVVKGHDWRLDQAAAT 495
            GLV   L                 G+++  T + LPF  + + +V+KG      +AA +
Sbjct: 250 QGLVNNLLIWLGVIEKPLRLMYNRVGVIVAMTHVLLPFMILPLYSVMKGISPVYLRAARS 309

Query: 496 LGANRVQTLMRVTVPLIRGGLVAAFLFAFITSFDELTVAIFVSGGVKTTL 545
           LGA      +RV +P    G  A  L  FI +         V G     L
Sbjct: 310 LGATPTIAFLRVYLPQCLPGFGAGALLTFILALGYYITPALVGGAADQML 359