Pairwise Alignments

Query, 624 a.a., Sialic acid TRAP transporter permease protein SiaT from Azospirillum sp. SherDot2

Subject, 430 a.a., TRAP transporter large permease from Rahnella sp. WP5

 Score =  196 bits (497), Expect = 2e-54
 Identities = 124/420 (29%), Positives = 216/420 (51%), Gaps = 11/420 (2%)

Query: 207 VFFVVVVAGSVFAGVPIAFAFGLSSFGYLALTTKVPLLVVVGRMDEGMSHLILLSVPLFV 266
           +  ++ +A  +  GVP+A+A GLS+    A    +P   ++ ++   ++   LL++P F+
Sbjct: 4   LILLLTLAVMLAIGVPVAYAVGLSALAG-AWWIDLPFEALMIQLTNDVNKFSLLAIPFFI 62

Query: 267 FLGLLIEMTGMARAMVAVLANLLGHVRGGLSYVLIGAMYLVSGISGSKAADMAAVAPVLF 326
             G ++   G+AR +V+     +G +RGGLS V I A      ISGS  AD A++  V+ 
Sbjct: 63  LAGAIMAEGGIARRLVSFAYIFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSVMI 122

Query: 327 PEMKNRGAKPGDLVALLAATGA-QTETIPPSIVLITIGSVTG--VSIAALFTGGLLPGLL 383
           PEM+ +G  P D  A + A+G+ Q    PPS   +     TG  VSIAALF  G+LPGLL
Sbjct: 123 PEMEKKGY-PRDFAAAVTASGSVQAILTPPSHNSVIYSLATGGTVSIAALFIAGILPGLL 181

Query: 384 LAVML---CLVVRHRYRNEDLSGVRRPTGGELGKSLVVALPALALPFVIRTAVIEGVATA 440
           L++ L   C+V  H+       G R P    L K  +  L  L    +I   ++ G+ TA
Sbjct: 182 LSLTLMVMCVVFAHKRGYP--KGERVPFRQAL-KIFIDTLWGLMTIVIIMGGILSGIFTA 238

Query: 441 TEVSTIGIVYAVAVGLLVYRRFDWRRVVPMLVETAALSGAILFIIGTATGMAWCLTRSGF 500
           TE + I  +++  V + +YR + W  +  ++  T      ++ +IG A      +T    
Sbjct: 239 TESAAIACLWSFFVTMFIYRDYKWSELPKLMYRTVKTVSIVMILIGFAASFGAVMTYMQL 298

Query: 501 STDLAHFMASLPGGSFTFLAVSIVAFIVLGSVLEGIPAIVLFGPLLFPIAREMGVHEVQY 560
              +  F  S+    +  L    +  +V+G++++  P I++  P+L P+   +G+  V +
Sbjct: 299 PMRITEFFTSISDNKYVILMWINIMLLVIGTLMDMAPIILILTPVLLPVVLSLGIDPVHF 358

Query: 561 AMVVILAMGLGLFAPPFGVGFYVASAIGRVNPDEGMRPIMGYLAALLAGLALVAAIPWIS 620
            M++++ +G+GL  PP G   +VASA+ + + ++ ++ ++ +   L   L LV  IP IS
Sbjct: 359 GMIMLVNLGIGLITPPVGSVLFVASAVSKQSIEKVVKAMLPFYCVLFVVLMLVTYIPTIS 418