Pairwise Alignments

Query, 299 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 310 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  201 bits (510), Expect = 2e-56
 Identities = 119/296 (40%), Positives = 174/296 (58%), Gaps = 6/296 (2%)

Query: 1   MDRLDELTIFVAILETGSLAGAAKRLRRSAPAVTRALSGLEERLGVRLIERTTRNLAPTD 60
           MDR+D + +FVA ++ GSLAGAA+RL+RS  AV+RALS LE  +GV L+ RTTR L  ++
Sbjct: 1   MDRIDAMKVFVAAIDEGSLAGAARRLKRSPTAVSRALSFLEAHVGVELLHRTTRTLKLSE 60

Query: 61  AGRRLAEQARRLLADYDEALAATGTDRPM-RGRLRVTAPVMFGRKHVTPLVLDFMREFPD 119
           AG+R A   RR+L D +EA    G +R   RG L +++P + G + + P++ DF+  +P 
Sbjct: 61  AGQRYAAACRRVLTDLEEADMLAGGERSAPRGMLTISSPPILGEEILRPILDDFLDLYPT 120

Query: 120 IRVELTLSDGNLDLIEEELDVAIRIGPLPDSGLVARRV-GQVGRFLVASPGYLARRGTPS 178
           + V L L D  ++L++E +D+A+RIG L DS L++ R+ G V R +VASP YLA      
Sbjct: 121 VSVRLLLLDRFVNLVDEGVDIALRIGQLADSSLISTRLGGDVRRVVVASPRYLANHPRIE 180

Query: 179 MPEDLSGHDIILTTARPGPPDWRFLI---DGRERVLRVTPKLAVSHIEPALLAARDGHGV 235
            P DL  H I+  T   G   W F         R ++ TP+  V+ +  A  +A  G G+
Sbjct: 181 EPADLDKHQILAFT-NFGLESWSFTPAKGSSVPRTIQFTPRCIVNSVRAAAASAAAGRGL 239

Query: 236 ARPLSYQAADDLAAGTLVRLMPHAEPEPLPVHVVVPTARLMPGRVRAFLDHAVQGL 291
            R  SY  A+ +  G L  ++  AE  PLP H++ P  R+   +VRAF+D A   L
Sbjct: 240 TRLYSYHVAEYVRDGRLEIVLADAEHPPLPAHLIAPQGRMSVPKVRAFVDFAAPRL 295