Pairwise Alignments

Query, 727 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 669 a.a., transposase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 46.2 bits (108), Expect = 5e-09
 Identities = 86/384 (22%), Positives = 145/384 (37%), Gaps = 36/384 (9%)

Query: 263 RMGPLALKALKSYIARDTGTLWPTAAYSADGHTFDAEVQHPIHGRPFRPELTAVIDLKTR 322
           R G  AL  L     R    +      + DG+  +  V+   +G   RP+     D+ +R
Sbjct: 242 RQGEHALHQLYPPQERSVEDMHAMQWINGDGYQHNVFVKW-FNGEILRPKTWFWQDVYSR 300

Query: 323 KIVGWSAALSENTWGVLDALRNACTSHGVPCIWYVDRGKGFNNDAMGAATDD------EA 376
           KI+GW   +SENT  +  +L +  +++G+P    +D  +   N  M     +      + 
Sbjct: 301 KIIGWRCDISENTDSIRLSLMDVFSTYGIPQELTIDNTRAAANKWMTGGVANRYRFKVKE 360

Query: 377 DDPATLGFLGRLGITKVNSIARNSQARGAMERVQGTVWVRAAKALPTYMGAPMDMEARQK 436
           DDP  LG +  +GI    S     +  G  + ++    V     L  Y+       +   
Sbjct: 361 DDP--LGLIPMMGIKLHWSSVILGKGHGQAKPIERAFGV---GGLEEYID---KHPSNHG 412

Query: 437 AFKATRAAVKNGVQSPLLMSWTAFLEWAQGVVEAYNARIHSSLPKLRDPQTGRARHQTPA 496
           A+  +    K        +    F++     VE YNA++  +    +   +     +   
Sbjct: 413 AYTGSNPTAKPDNYGSKAIDAEVFIQTIAKGVEMYNAKVGRTTEACKGFMSFDQAFEASY 472

Query: 497 EAWEAGAAAPGVEIDIPSAAEAEDLFRPMVKRTPRRGLVELFGNQYHNRALEHVDGDVLV 556
           +  E   A       +   AEA  + +         G ++   N+Y+N  L +  G  LV
Sbjct: 473 QTAEIRKATKAQLYMMMLQAEAALVSKHGTLTLDAGGSIKGRKNRYYNEQLMNYVGKKLV 532

Query: 557 A----YDIHDAEWVWVRDLDGRLICKAQW---DA-----------HKRDYFPKSVLDQAA 598
           A      +HD+  + V  L+G  IC A+    DA            KR  F K+   QAA
Sbjct: 533 ARFDPQKLHDS--IEVYALNGVHICTAECIEKDAFNDTQSARETKRKRTQFVKN-NKQAA 589

Query: 599 ERRSKAAVKRLAAHADTALAELGP 622
           E +    +  LAA    A  E+ P
Sbjct: 590 EAKLSVDMLELAAMMRPAAEEVIP 613