Pairwise Alignments

Query, 672 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1145 a.a., sensor histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  184 bits (467), Expect = 2e-50
 Identities = 125/412 (30%), Positives = 204/412 (49%), Gaps = 47/412 (11%)

Query: 238  AKERAEQAVASKAKFMAAASHDLRQPAQSLLMLTAMLRATAPSPKVAESARK----IEQV 293
            AK + E A ASK++F+AA  HDL QP  +  + TA L   +  P +   AR     +   
Sbjct: 773  AKAQEEMANASKSRFLAAVGHDLMQPLNAARLFTASL---SQYPNLDREARTTLSHVNSS 829

Query: 294  VMTLKQLLDELLEVSRLDAGGVTANIAVHEVADLFDALDSQYGPVARNKGLAFSVPQYRA 353
            + T  +LL +LL++S+LD+G V  N     +++L + L  ++  +A +  + F +    A
Sbjct: 830  LKTAGELLTDLLDISKLDSGMVDVNRRDFAISELLNGLSVEFEAMAADNQIRFKMIPCSA 889

Query: 354  PVLTDRVLLLRLLGNLIDNAIRYTPSGQVQVACLESGGSLIVEVRDTGIGIPEDRLDAIW 413
             V +D  LL R+L N + NA RY   G+V   C   G  L ++V DTG GI E     I+
Sbjct: 890  TVNSDPSLLRRVLQNFLTNAYRYARGGRVLFGCRHRGSELEIQVLDTGCGIDEHETHEIF 949

Query: 414  EEFHQIGNPERNRDNGIGLGLSIVRRLAGVLDHPVKVRSTPGKGSVFSVTLPLAPVETAL 473
            +EF ++ NP     +G+GLGL+I  R++ VL+H ++V S  G+GSVFS+T+PL   ET  
Sbjct: 950  KEFKRLNNPRSKSVSGLGLGLAIADRISRVLNHGIQVSSQLGRGSVFSITVPLG--ETVR 1007

Query: 474  EPAMEPMRRAEISSVPAPAPAAIPAMVATPAPVSAPAAVAGLATLADAPAKSGEIAILVI 533
            +P ++                A+P+++    P+S                    I +L I
Sbjct: 1008 QPQVK----------------ALPSLLQ---PLSG-------------------IKVLCI 1029

Query: 534  DDDQFVLSAISMFLNTAGHRVVGASSVAQGLRAVEGGDIRPDAVIADYHLSATENGLDFI 593
            D+++ +L+ +   L+     V+ A  +A     +    + PD V+AD+HL   +NG+D +
Sbjct: 1030 DNEEAILAGLESLLSRWQCEVICAKDLADARIKLGLKGVAPDIVLADFHLDDGQNGVDAM 1089

Query: 594  DTVWRRLGLRIPAVLISGRLDGAVTARAAEMGVIVAAKPIMPDRLSALVEQM 645
            D +    G  +P +LI+      +       G    AK I P  L AL+  +
Sbjct: 1090 DGIRSLYGKDLPGILITANTRKELVEDVQRRGYHYMAKMIKPAALRALISSL 1141