Pairwise Alignments

Query, 312 a.a., Glycine cleavage system transcriptional activator from Azospirillum sp. SherDot2

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella amazonensis SB2B

 Score =  169 bits (427), Expect = 1e-46
 Identities = 114/306 (37%), Positives = 153/306 (50%), Gaps = 14/306 (4%)

Query: 5   RLPPLRTLLFFEAAGRLLSFSAAARELACTQSAVSHQIGWLEADLGTPLFRRLHRGVALT 64
           RLPPL  +  FEAA R LSF+ AA EL  TQ+AVSHQI  LE  LG  LFRR +R + LT
Sbjct: 4   RLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLLT 63

Query: 65  PDGVRLYEATRDALDGIGDAVTRIRDRRRPGVLNVATDFGFAAGWLLPRLSALRQLLPEL 124
            +G   +   +D    + DA  R+  R   G L V+    FA  WL+PRL+   +  P++
Sbjct: 64  EEGQSYFLDIKDIFTQLSDATDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSEKNPDI 123

Query: 125 DVRIVTMQTAIDLRREAADIAITFGHGHWPGCEAELLFPERVLPVCSPAFRASRAPHAAE 184
           DVRI  + +      +  D+AI +G G WPG  A+ L  E ++PVCSP       P    
Sbjct: 124 DVRIKAVDSEEGSLTDDVDVAIYYGQGSWPGLRADKLRNEVLIPVCSPMLLNGHKP---- 179

Query: 185 GAGNPADLSSLPLLHLESVGPAAWLSWGDWFTLHGLPMPAGGQELTFNNYPLVLQAALMG 244
               PADL    LLH       +   W  WF   G+      Q   F++  LVLQAA  G
Sbjct: 180 -LETPADLKHHTLLH-----DMSRHDWQAWFRQCGVTDVNVNQGPIFSHSSLVLQAAAHG 233

Query: 245 QGVALGWSPLIDDLMRDGHLVSLLDRPIQTERGYFLVVPSRRGTDERHDRFHRWVV---- 300
           QGVALG+S L    ++ G LV      + ++  Y+LV         +   F  W++    
Sbjct: 234 QGVALGYSVLARPDIKAGRLVVPFQEVLVSKDAYYLVCQQNHAELGKIVAFREWMLDMFA 293

Query: 301 EESRRD 306
           EESR +
Sbjct: 294 EESRSE 299