Pairwise Alignments

Query, 369 a.a., Spermidine-binding periplasmic protein SpuE from Azospirillum sp. SherDot2

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 18/315 (5%)

Query: 25  AAAAVGAVGFPSIVRAQSKSLKVGVYGGYFKDSFDKHIFPDFTKATGIAVEAVAEPTGEA 84
           A+A   A  F +   A+ + L    Y   + +     +  DFTK TGI V      + E+
Sbjct: 7   ASALCAAALFTTNAMAKDQEL----YFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNES 62

Query: 85  WLIQLEQAARAKQAPADVSMMSQVAMLKGMAAELWAPLDPARLPNAAKVKPALMNK-YPD 143
              +L    + + A  D+ + S   + K     +   +D ++L +   + P  +NK +  
Sbjct: 63  MYAKL----KTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDP 118

Query: 144 GRLSGIGAVSWYITLVTNTKSYPQAP-ESWATLWDPANKDKLGLLALVSNSFLLDVTAAT 202
           G    I  +     +  NT    +   ++W  LWD     +L L+      F +   A +
Sbjct: 119 GNKFSIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHI---ALS 175

Query: 203 FFGGPKHLDSEQGQLECFKKLAELKNNVKLWYRDEAQFEA-ALKSGEVPMGQYYHDVTGL 261
             G   +  + +     +++L +L  NV ++  D   F A    +GEV +G  ++    +
Sbjct: 176 KLGYSPNTTNPKEIKAAYRELKKLMPNVLVFNSD---FPANPYLAGEVSLGMLWNGSAYM 232

Query: 262 AAADGHPVRSTFPKEGGILDSGSWAVSKASKAADLAHVFIDYMCQPQIQALLSRKVGTSP 321
           A  +G P++  +P++G I    S ++   +K  + AH  ID++ +P+  A ++ ++G  P
Sbjct: 233 ARQEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIG-YP 291

Query: 322 TIDRSATDLTDKEFA 336
           T  ++A DL  KEFA
Sbjct: 292 TPVKTAHDLLPKEFA 306